Characterizing pH-dependent stability profile of endo-β-mannanase enzyme: an in silico approach

This research focuses on the characterization of four mannanase enzymes regarding their structure and stability across various pH conditions. The study employed in silico techniques, including homology modelling, protein superimposition, protonation state assignment, and molecular dynamics simulations, to analyze the enzyme's structure and behaviour. The results revealed distinct characteristics for each enzyme, suggesting their potential for different industrial applications. Furthermore, the study identified mutations involving titratable residues as crucial in determining enzyme character under varying pH conditions.

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Publication Details

Journal
Journal of Biomolecular Structure and Dynamics
Published
2024-12-01
DOI
https://doi.org/10.1080/07391102.2024.2434032
Primary Topic
Enzyme Structure and Function
Type
article
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article

Characterizing pH-dependent stability profile of endo-β-mannanase enzyme: an in silico approach

Adi Yulandi, Antonius Suwanto, Gilbert Suryadihardja
Journal of Biomolecular Structure and Dynamics
Enzyme Structure and Function
article

Characterizing pH-dependent stability profile of endo-β-mannanase enzyme: an in silico approach

Adi Yulandi, Antonius Suwanto, Gilbert Suryadihardja
article en

Abstract

This research focuses on the characterization of four mannanase enzymes regarding their structure and stability across various pH conditions. The study employed in silico techniques, including homology modelling, protein superimposition, protonation state assignment, and molecular dynamics simulations, to analyze the enzyme's structure and behaviour. The results revealed distinct characteristics for each enzyme, suggesting their potential for different industrial applications. Furthermore, the study identified mutations involving titratable residues as crucial in determining enzyme character under varying pH conditions.

Journal of Biomolecular Structure and DynamicsVol. 43(18)
Atma Jaya Catholic University of Indonesia (ID), IPB University (ID), Department of Biotechnology (IN)
Clean water and sanitation
Openalex Percentile: Top 86%
Enzyme Structure and Function
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Characterizing pH-dependent stability profile of endo-β-mannanase enzyme: an in silico approach — Adi Yulandi, Antonius Suwanto, et al. · Journal of Biomolecular Structure and Dynamics (2024) | TGRS Research Map | TGRS