Improving spike sorting efficiency with separability index and spectral clustering

This study explores the effectiveness of spectral clustering for spike sorting and proposes a Separability Index to measure the difficulty of spike sorting for a signal. The accuracy of spectral clustering is evaluated using different feature sets, including raw samples, first and second derivatives, and principal components analysis (PCA), and compared to two previously published methods. The results obtained over a dataset including 16 signals show that raw samples, with an average accuracy of 73.84 %, are effective for spectral clustering-based spike sorting. The analysis demonstrates that the proposed Separability Index can be utilized to classify signals beforehand, reducing the cost and processing time of large datasets. Furthermore, the proposed index can reveal spike sorting difficulty, making it a valuable tool for comparing the performance of various spike sorting methods in depth. The proposed method has higher accuracy (up to 23 %) compared to two previously published methods, and its accuracy is aligned with the Separability Index (correlation coefficient = 0.71). Overall, this study contributes to the field of spike sorting and offers insights into leveraging spectral clustering for this task.

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Publication Details

Journal
Medical Engineering & Physics
Published
2024-11-28
DOI
https://doi.org/10.1016/j.medengphy.2024.104265
Primary Topic
Neural Networks and Applications
Type
article
Field-Weighted Citation Impact
0.00

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article

Improving spike sorting efficiency with separability index and spectral clustering

Hossein Parsaei, Mohammad Mehdi Movahedi, Sam Sharifzadeh Javidi, Leila Ranjbar
Medical Engineering & Physics
Neural Networks and Applications
article

Improving spike sorting efficiency with separability index and spectral clustering

Hossein Parsaei, Mohammad Mehdi Movahedi, Sam Sharifzadeh Javidi, Leila Ranjbar
article en

Abstract

This study explores the effectiveness of spectral clustering for spike sorting and proposes a Separability Index to measure the difficulty of spike sorting for a signal. The accuracy of spectral clustering is evaluated using different feature sets, including raw samples, first and second derivatives, and principal components analysis (PCA), and compared to two previously published methods. The results obtained over a dataset including 16 signals show that raw samples, with an average accuracy of 73.84 %, are effective for spectral clustering-based spike sorting. The analysis demonstrates that the proposed Separability Index can be utilized to classify signals beforehand, reducing the cost and processing time of large datasets. Furthermore, the proposed index can reveal spike sorting difficulty, making it a valuable tool for comparing the performance of various spike sorting methods in depth. The proposed method has higher accuracy (up to 23 %) compared to two previously published methods, and its accuracy is aligned with the Separability Index (correlation coefficient = 0.71). Overall, this study contributes to the field of spike sorting and offers insights into leveraging spectral clustering for this task.

Medical Engineering & PhysicsVol. 135(1)
Shiraz University of Medical Sciences (IR), Tehran University of Medical Sciences (IR)
Shiraz University of Medical Sciences
Affordable and clean energy
Openalex Percentile: Top 80%
Neural Networks and Applications
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Improving spike sorting efficiency with separability index and spectral clustering — Hossein Parsaei, Mohammad Mehdi Movahedi, et al. · Medical Engineering & Physics (2024) | TGRS Research Map | TGRS