Genome-Wide Identification and Expression Profiles of Nuclear Factor Y A Transcription Factors in Blueberry Under Abiotic Stress

Nuclear Factor Y A (NF-YA) transcription factors are widely involved in multiple plant biological processes, such as embryogenesis, abscisic acid signaling, and abiotic stress response. This study presents a comprehensive genome-wide identification and expression profiling of NF-YA transcription factors in blueberry (<i>Vaccinium corymbosum</i>), an important economic crop with good adaptability, under abiotic stress conditions. Given the economic significance and health benefits of blueberries, understanding their responses to environmental stresses, such as salt, drought, and temperature extremes, is crucial. A total of 24 NF-YA transcription factors were identified through bioinformatics analyses, including sequence alignment, phylogenetic tree construction, and conserved motif analysis. The expression patterns of these <i>NF-YA</i> genes were evaluated in various tissues (roots, stems, and leaves) and under different stress treatments (abscisic acid, salt, and cold) using quantitative real-time PCR (qRT-PCR). The results indicated that most <i>VcNF-YA</i> genes exhibited higher expression levels in stems and leaves compared to roots. Most <i>VcNF-YA</i>s were responsive to the stress treatment. Furthermore, <i>cis</i>-acting element analysis revealed that the promoters of <i>VcNF-YA</i>s were enriched with elements responsive to abiotic stress, suggesting their pivotal role in stress adaptation. This research unveils the expressional responses of NF-YA transcription factors in blueberry upon abiotic stresses and lays the groundwork for future studies on improving crop adaptation.

Authors

Institutions

Publication Details

Journal
International Journal of Molecular Sciences
Published
2024-11-28
DOI
https://doi.org/10.3390/ijms252312832
Citations
3
Primary Topic
Plant Molecular Biology Research
Type
article
Field-Weighted Citation Impact
1.80
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Genome-Wide Identification and Expression Profiles of Nuclear Factor Y A Transcription Factors in Blueberry Under Abiotic Stress

Shuwei Sun, Xiuyue Xu, Xiang Zhang, Jiajie Yu et al.
3 citations
International Journal of Molecular Sciences
Plant Molecular Biology Research
1.80
article

Genome-Wide Identification and Expression Profiles of Nuclear Factor Y A Transcription Factors in Blueberry Under Abiotic Stress

Shuwei Sun, Xiuyue Xu, Xiang Zhang, Jiajie Yu, Jing Sun, Hong Su
article en
3 citations

Abstract

Nuclear Factor Y A (NF-YA) transcription factors are widely involved in multiple plant biological processes, such as embryogenesis, abscisic acid signaling, and abiotic stress response. This study presents a comprehensive genome-wide identification and expression profiling of NF-YA transcription factors in blueberry (<i>Vaccinium corymbosum</i>), an important economic crop with good adaptability, under abiotic stress conditions. Given the economic significance and health benefits of blueberries, understanding their responses to environmental stresses, such as salt, drought, and temperature extremes, is crucial. A total of 24 NF-YA transcription factors were identified through bioinformatics analyses, including sequence alignment, phylogenetic tree construction, and conserved motif analysis. The expression patterns of these <i>NF-YA</i> genes were evaluated in various tissues (roots, stems, and leaves) and under different stress treatments (abscisic acid, salt, and cold) using quantitative real-time PCR (qRT-PCR). The results indicated that most <i>VcNF-YA</i> genes exhibited higher expression levels in stems and leaves compared to roots. Most <i>VcNF-YA</i>s were responsive to the stress treatment. Furthermore, <i>cis</i>-acting element analysis revealed that the promoters of <i>VcNF-YA</i>s were enriched with elements responsive to abiotic stress, suggesting their pivotal role in stress adaptation. This research unveils the expressional responses of NF-YA transcription factors in blueberry upon abiotic stresses and lays the groundwork for future studies on improving crop adaptation.

International Journal of Molecular SciencesVol. 25(23)
Northeast Forestry University (CN), Eastern Liaoning University (CN)
Zero hunger
Openalex Percentile: Top 12%
Plant Molecular Biology Research
1.80
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.