Characteristics and Expression Analysis of the MYB-Related Subfamily Gene in Rosa chinensis
MYB-related transcription factors (TFs) subfamily is a subfamily of MYB TFs, which are mainly involved in plant secondary metabolism, growth and development, and stress response. To explore the function of MYB-related subfamily genes in <i>Rosa chinensis</i>, this study systematically analyzed characters of the MYB-related subfamily members in <i>R</i>. <i>chinensis</i> with bioinformatic analysis using the genomic data of <i>R</i>. <i>chinensis</i> and investigated their expression characteristics using quantitative real-time PCR (qRT-PCR). The results show that 100 MYB-related proteins were identified in <i>R</i>. <i>chinensis</i>. Proteins are mainly found in the nucleus. Chromosome localization revealed that all MYB-related genes are mapped to seven chromosomes and are distributed in clusters. Collinear analysis shows that 13 pairs of MYB-related genes had a collinear relationship, indicating <i>R. chinensis</i> may have evolved its MYB-related subfamily gene through fragment duplication. The analysis of motifs and conserved domains shows that Motif 3 is the most conserved motif. There are numerous ABA and MeJA response elements in MYB-related genes. ABA and MeJA treatments significantly shortened the vase life of <i>R. chinensis</i>, while the flower diameter on day 3 was the largest, suggesting that ABA and MeJA might induce MYB-related gene expression during cut flower senescence. The expression of MYB-related genes is tissue specific, most of which show the highest expression levels in petals. Notably, among six plant growth regulator treatments, ABA treatment significantly increased <i>RcMYB002</i> expression in <i>R. chinensis</i>, suggesting that <i>RcMYB002</i> may be a crucial gene for ABA response. This study provides a reference for further research on the function of MYB-related genes in <i>R</i>. <i>chinensis</i>.
Authors
- Xuejuan Pan
- Yuzheng Deng
- Yandong Yao
- Yongjie Zhu (ORCID: https://orcid.org/0000-0002-8714-2647)
- W. P. Daniel Su (ORCID: https://orcid.org/0009-0006-9874-2361)
- Xuetong Wu
- Zhiya Liu (ORCID: https://orcid.org/0000-0001-5686-9678)
- Jitao Zhang (ORCID: https://orcid.org/0000-0001-7050-7569)
- Weibiao Liao (ORCID: https://orcid.org/0000-0002-7404-2145)
- Kangding Yao
Institutions
- Gansu Agricultural University (CN)
Publication Details
- Journal
- International Journal of Molecular Sciences
- Published
- 2024-11-29
- DOI
- https://doi.org/10.3390/ijms252312854
- Citations
- 3
- Primary Topic
- Plant Gene Expression Analysis
- Type
- article
- Field-Weighted Citation Impact
- 0.70
Funders
- National Natural Science Foundation of China