Mechanistic basis for the emergence of EPS1 as a catalyst in salicylic acid biosynthesis of Brassicaceae
Salicylic acid (SA) production in Brassicaceae plants is uniquely accelerated from isochorismate by EPS1, a newly identified enzyme in the BAHD acyltransferase family. We present crystal structures of EPS1 from Arabidopsis thaliana in both its apo and substrate-analog-bound forms. Integrating microsecond-scale molecular dynamics simulations with quantum mechanical cluster modeling, we propose a pericyclic rearrangement lyase mechanism for EPS1. We further reconstitute the isochorismate-derived SA biosynthesis pathway in Saccharomyces cerevisiae, establishing an in vivo platform to examine the impact of active-site residues on EPS1 functionality. Moreover, stable transgenic expression of EPS1 in soybean increases basal SA levels, highlighting the enzyme's potential to enhance defense mechanisms in non-Brassicaceae plants lacking an EPS1 ortholog. Our findings illustrate the evolutionary adaptation of an ancestral enzyme's active site to enable a novel catalytic mechanism that boosts SA production in Brassicaceae plants.
Authors
- Colin Y. Kim (ORCID: https://orcid.org/0000-0001-9583-9789)
- Jason O. Matos (ORCID: https://orcid.org/0000-0003-3795-0512)
- Christopher M. Glinkerman (ORCID: https://orcid.org/0000-0003-0435-7966)
- Tianjie Li (ORCID: https://orcid.org/0000-0003-4734-1577)
- Jing‐Ke Weng (ORCID: https://orcid.org/0000-0003-3059-0075)
- Heather Janine Kulik (ORCID: https://orcid.org/0000-0001-9342-0191)
- David W. Kastner (ORCID: https://orcid.org/0000-0002-7766-4249)
- Michael P. Torrens-Spence (ORCID: https://orcid.org/0000-0003-2644-1712)
- Yi Wang (ORCID: https://orcid.org/0000-0002-4174-8790)
- Ziqi Wang (ORCID: https://orcid.org/0009-0007-6701-5177)
- Jennifer Sherk
Institutions
- Northeastern University (US)
- Harvard University (US)
- Chinese University of Hong Kong (HK)
- Interface (United States) (US)
- Whitehead Institute for Biomedical Research (US)
- Massachusetts Institute of Technology (US)
Publication Details
- Journal
- Nature Communications
- Published
- 2024-11-28
- DOI
- https://doi.org/10.1038/s41467-024-54437-1
- Citations
- 11
- Primary Topic
- Plant nutrient uptake and metabolism
- Type
- article
- Field-Weighted Citation Impact
- 6.60
Funders
- National Science Foundation
- W. M. Keck Foundation
- Searle Scholars Program
- Division of Chemistry