Mechanistic basis for the emergence of EPS1 as a catalyst in salicylic acid biosynthesis of Brassicaceae

Salicylic acid (SA) production in Brassicaceae plants is uniquely accelerated from isochorismate by EPS1, a newly identified enzyme in the BAHD acyltransferase family. We present crystal structures of EPS1 from Arabidopsis thaliana in both its apo and substrate-analog-bound forms. Integrating microsecond-scale molecular dynamics simulations with quantum mechanical cluster modeling, we propose a pericyclic rearrangement lyase mechanism for EPS1. We further reconstitute the isochorismate-derived SA biosynthesis pathway in Saccharomyces cerevisiae, establishing an in vivo platform to examine the impact of active-site residues on EPS1 functionality. Moreover, stable transgenic expression of EPS1 in soybean increases basal SA levels, highlighting the enzyme's potential to enhance defense mechanisms in non-Brassicaceae plants lacking an EPS1 ortholog. Our findings illustrate the evolutionary adaptation of an ancestral enzyme's active site to enable a novel catalytic mechanism that boosts SA production in Brassicaceae plants.

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Publication Details

Journal
Nature Communications
Published
2024-11-28
DOI
https://doi.org/10.1038/s41467-024-54437-1
Citations
11
Primary Topic
Plant nutrient uptake and metabolism
Type
article
Field-Weighted Citation Impact
6.60

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article

Mechanistic basis for the emergence of EPS1 as a catalyst in salicylic acid biosynthesis of Brassicaceae

Colin Y. Kim, Jason O. Matos, Christopher M. Glinkerman, Tianjie Li et al.
11 citations
Nature Communications
Plant nutrient uptake and metabolism
6.60
article

Mechanistic basis for the emergence of EPS1 as a catalyst in salicylic acid biosynthesis of Brassicaceae

Colin Y. Kim, Jason O. Matos, Christopher M. Glinkerman, Tianjie Li, Jing‐Ke Weng, Heather Janine Kulik, David W. Kastner, Michael P. Torrens-Spence, Yi Wang, Ziqi Wang, Jennifer Sherk
article en
11 citations

Abstract

Salicylic acid (SA) production in Brassicaceae plants is uniquely accelerated from isochorismate by EPS1, a newly identified enzyme in the BAHD acyltransferase family. We present crystal structures of EPS1 from Arabidopsis thaliana in both its apo and substrate-analog-bound forms. Integrating microsecond-scale molecular dynamics simulations with quantum mechanical cluster modeling, we propose a pericyclic rearrangement lyase mechanism for EPS1. We further reconstitute the isochorismate-derived SA biosynthesis pathway in Saccharomyces cerevisiae, establishing an in vivo platform to examine the impact of active-site residues on EPS1 functionality. Moreover, stable transgenic expression of EPS1 in soybean increases basal SA levels, highlighting the enzyme's potential to enhance defense mechanisms in non-Brassicaceae plants lacking an EPS1 ortholog. Our findings illustrate the evolutionary adaptation of an ancestral enzyme's active site to enable a novel catalytic mechanism that boosts SA production in Brassicaceae plants.

Nature CommunicationsVol. 15(1)
Northeastern University (US), Harvard University (US), Chinese University of Hong Kong (HK), Interface (United States) (US), Whitehead Institute for Biomedical Research (US), Massachusetts Institute of Technology (US)
National Science Foundation, W. M. Keck Foundation, Searle Scholars Program, Division of Chemistry
Zero hunger
Openalex Percentile: Top 4%
Plant nutrient uptake and metabolism
6.60
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