Urinary Bladder Cancer Screening With Electronic Noses Based on Few-Shot Contrastive Representation Learning and Open-Set Recognition

Deploying electronic noses (e-noses) in disease screening tasks in real-world environments is hindered by limited training samples and interference from other nontarget odor categories. To address these challenges, we propose a novel algorithmic framework based on few-shot learning and open-set recognition. First, discriminative and compact odor representations are learned via a contrastive representation learning algorithm under closed-set classification settings. At this stage, an autoencoder-based data hallucination algorithm is employed to augment samples of interest from its related gas samples to alleviate the sample size problem. Then, disease screening is realized by modifying the closed-set model with an open-set recognition algorithm. The proposed framework was evaluated for urinary bladder cancer (UBC) diagnosis. Experimental results demonstrated that the method, trained with only five UBC samples, achieved an F1 score of <inline-formula xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"> <tex-math notation="LaTeX">$0.8907~\pm ~0.0158$ </tex-math></inline-formula>, even in the presence of ten nontarget odor categories. The F1 scores obtained under three-shot learning and one-shot learning were <inline-formula xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"> <tex-math notation="LaTeX">$0.8393~\pm ~0.0082$ </tex-math></inline-formula> and <inline-formula xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"> <tex-math notation="LaTeX">$0.7517~\pm ~0.0132$ </tex-math></inline-formula>, respectively. Moreover, clinical confounding factors had minimal impact on the result of open-set recognition. This framework shows good potential for applications requiring robust target odor recognition amidst nontarget odor interference.

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Publication Details

Journal
IEEE Sensors Journal
Published
2024-11-27
DOI
https://doi.org/10.1109/jsen.2024.3490841
Citations
8
Primary Topic
Advanced Chemical Sensor Technologies
Type
article
Field-Weighted Citation Impact
1.48

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article

Urinary Bladder Cancer Screening With Electronic Noses Based on Few-Shot Contrastive Representation Learning and Open-Set Recognition

Taoping Liu, Weitian Huang, Weiwei Wu, Jinhai Fan et al.
8 citations
IEEE Sensors Journal
Advanced Chemical Sensor Technologies
1.48
article

Urinary Bladder Cancer Screening With Electronic Noses Based on Few-Shot Contrastive Representation Learning and Open-Set Recognition

Taoping Liu, Weitian Huang, Weiwei Wu, Jinhai Fan, Yingying Jian, Chan Li, Yunzhe Bi, Nan Zhang
article en
8 citations

Abstract

Deploying electronic noses (e-noses) in disease screening tasks in real-world environments is hindered by limited training samples and interference from other nontarget odor categories. To address these challenges, we propose a novel algorithmic framework based on few-shot learning and open-set recognition. First, discriminative and compact odor representations are learned via a contrastive representation learning algorithm under closed-set classification settings. At this stage, an autoencoder-based data hallucination algorithm is employed to augment samples of interest from its related gas samples to alleviate the sample size problem. Then, disease screening is realized by modifying the closed-set model with an open-set recognition algorithm. The proposed framework was evaluated for urinary bladder cancer (UBC) diagnosis. Experimental results demonstrated that the method, trained with only five UBC samples, achieved an F1 score of <inline-formula xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"> <tex-math notation="LaTeX">$0.8907~\pm ~0.0158$ </tex-math></inline-formula>, even in the presence of ten nontarget odor categories. The F1 scores obtained under three-shot learning and one-shot learning were <inline-formula xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"> <tex-math notation="LaTeX">$0.8393~\pm ~0.0082$ </tex-math></inline-formula> and <inline-formula xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"> <tex-math notation="LaTeX">$0.7517~\pm ~0.0132$ </tex-math></inline-formula>, respectively. Moreover, clinical confounding factors had minimal impact on the result of open-set recognition. This framework shows good potential for applications requiring robust target odor recognition amidst nontarget odor interference.

IEEE Sensors JournalVol. 25(1)
Ministry of Ecology and Environment (CN), First Affiliated Hospital of Xi'an Jiaotong University (CN), Nuclear and Radiation Safety Center (CN)
Key Research and Development Projects of Shaanxi Province, Natural Science Basic Research Program of Shaanxi Province
Openalex Percentile: Top 19%
Advanced Chemical Sensor Technologies
1.48
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