Properties of Maxentropic DNA Synthesis Codes
Low-weight codes have been proposed for efficiently synthesizing deoxyribonucleic acid (DNA) for massive data storage, where a multiple of DNA strands are synthesized in parallel. We report on the redundancy and information rate of maxentropic low-weight codes for asymptotically large codeword length. We compare the performance of low-complexity nibble replacement (NR) codes, which are designed to minimize the synthesis time, with the performance of maxentropic low-weight codes. Finally, the asymptotic redundancy and information rate of codes with a runlength limitation are investigated.
Authors
- Kees A. Schouhamer Immink (ORCID: https://orcid.org/0000-0001-6747-9261)
- Kui Cai (ORCID: https://orcid.org/0000-0003-2059-0071)
- Jos H. Weber (ORCID: https://orcid.org/0000-0002-8333-1301)
Institutions
- Singapore University of Technology and Design (SG)
- Delft University of Technology (NL)
Publication Details
- Journal
- Entropy
- Published
- 2024-11-27
- DOI
- https://doi.org/10.3390/e26121028
- Citations
- 2
- Primary Topic
- DNA and Biological Computing
- Type
- article
- Field-Weighted Citation Impact
- 0.47
Funders
- Singapore University of Technology and Design