Supervised Pretraining and Self-Supervised Finetuning enables Robust Reconstruction of High-Resolution 7T MP2RAGE for Multiple Sclerosis

Motivation: The infeasibility to collect large datasets of high-resolution, fully-sampled 7T data hinders the training of deep learning reconstructions for accelerated high-resolution 7T scans. Goal(s): Demonstrate that combining pretraining on fully-sampled scans from 1.5/3T and self-supervised finetuning on a few undersampled 7T scans enables robust reconstruction. Approach: High-resolution(0.5mm isotropic), 3D, 7T MP2RAGE scans of multiple sclerosis patients are used for finetuning/testing. Results: Deep learning reconstructions from one 7T scan have higher apparent SNR than a median of GRAPPA reconstructions from three scans, currently used for assessment, with similar tissue contrast and lesion conspicuity, potentially reducing scan time by a factor of three. Impact: Very high-resolution 3D scans can require infeasible acquisition time to generate images suitable for clinical use. Our work shows the potential for deep learning reconstructions to reduce scan time by a factor of three, without fully-sampled 7T data.

Authors

Publication Details

Journal
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Published
2024-11-26
DOI
https://doi.org/10.58530/2024/2820
Primary Topic
Medical Imaging Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00
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article

Supervised Pretraining and Self-Supervised Finetuning enables Robust Reconstruction of High-Resolution 7T MP2RAGE for Multiple Sclerosis

Francesco La Rosa, Tom Hilbert, Henry Dieckhaus, Patrick Alexander Liebig et al.
1 links
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Medical Imaging Techniques and Applications
article

Supervised Pretraining and Self-Supervised Finetuning enables Robust Reconstruction of High-Resolution 7T MP2RAGE for Multiple Sclerosis

Francesco La Rosa, Tom Hilbert, Henry Dieckhaus, Patrick Alexander Liebig, Dominik M. Nickel, Govind Nair, Gian Franco Piredda, Jean‐Philippe Thiran, Thomas Yu, Jonadab dos Santos Silva, Tobias Kober, Erin Beck
article en

Abstract

Motivation: The infeasibility to collect large datasets of high-resolution, fully-sampled 7T data hinders the training of deep learning reconstructions for accelerated high-resolution 7T scans. Goal(s): Demonstrate that combining pretraining on fully-sampled scans from 1.5/3T and self-supervised finetuning on a few undersampled 7T scans enables robust reconstruction. Approach: High-resolution(0.5mm isotropic), 3D, 7T MP2RAGE scans of multiple sclerosis patients are used for finetuning/testing. Results: Deep learning reconstructions from one 7T scan have higher apparent SNR than a median of GRAPPA reconstructions from three scans, currently used for assessment, with similar tissue contrast and lesion conspicuity, potentially reducing scan time by a factor of three. Impact: Very high-resolution 3D scans can require infeasible acquisition time to generate images suitable for clinical use. Our work shows the potential for deep learning reconstructions to reduce scan time by a factor of three, without fully-sampled 7T data.

Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Openalex Percentile: Top 62%
Medical Imaging Techniques and Applications
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