Weak supervision in multi-coil accelerated MR image reconstruction

Motivation: In training-data-limited settings, weak supervision –cooperatively utilizing under-sampled and fully-sampled datasets– can be advantageous. Goal(s): To compare weakly-supervised multi-coil Magnetic Resonance (MR) image reconstruction against reconstruction using only under-sampled or fully-sampled datasets in high- and low-data regimes. Approach: Pretrain a Variational Network (VarNet) in a self-supervised manner by minimizing L1 loss in k-space using a 4x under-sampled dataset. Transfer the pre-trained weights to another VarNet and fine-tune it using a smaller, fully sampled dataset by optimizing MS-SSIM loss in image space. Results: We demonstrate improvements in reconstruction quality in the high-data regime as well as enhanced robustness of reconstruction in the low-data regime. Impact: Multi-coil MR image reconstruction exploiting both under-sampled and fully-sampled datasets is achievable with transfer learning and fine-tuning. Our proposed methodology can provide improved reconstruction quality and robustness.

Authors

Publication Details

Journal
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Published
2024-11-26
DOI
https://doi.org/10.58530/2024/1767
Primary Topic
Advanced MRI Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00
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article

Weak supervision in multi-coil accelerated MR image reconstruction

Daniel K. Sodickson, Arda Atalık, Sumit Chopra
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Advanced MRI Techniques and Applications
article

Weak supervision in multi-coil accelerated MR image reconstruction

Daniel K. Sodickson, Arda Atalık, Sumit Chopra
article en

Abstract

Motivation: In training-data-limited settings, weak supervision –cooperatively utilizing under-sampled and fully-sampled datasets– can be advantageous. Goal(s): To compare weakly-supervised multi-coil Magnetic Resonance (MR) image reconstruction against reconstruction using only under-sampled or fully-sampled datasets in high- and low-data regimes. Approach: Pretrain a Variational Network (VarNet) in a self-supervised manner by minimizing L1 loss in k-space using a 4x under-sampled dataset. Transfer the pre-trained weights to another VarNet and fine-tune it using a smaller, fully sampled dataset by optimizing MS-SSIM loss in image space. Results: We demonstrate improvements in reconstruction quality in the high-data regime as well as enhanced robustness of reconstruction in the low-data regime. Impact: Multi-coil MR image reconstruction exploiting both under-sampled and fully-sampled datasets is achievable with transfer learning and fine-tuning. Our proposed methodology can provide improved reconstruction quality and robustness.

Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
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Advanced MRI Techniques and Applications
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Weak supervision in multi-coil accelerated MR image reconstruction — Daniel K. Sodickson, Arda Atalık, et al. · Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition (2024) | TGRS Research Map | TGRS