Pretraining using masked language modeling improves label noise robustness on the metadata standardization task

Motivation: The lack of standardization in MRI metadata increases radiologist workload. Goal(s): To demonstrate an approach to standardize the image contrast and the body part examined information in the DICOM header and to understand the benefits of self-supervised pretraining on the metadata standardization task in the presence of label noise. Approach: Masked language modeling was used for pretraining. At the fine-tuning stage, a transformer model was used to predict the image contrast and body part from both the text and numerical DICOM tags. Results: Pretraining improves robustness to label noise, with there being no loss in performance at 20% label noise. Impact: Pretraining using masked language modeling is effective at rendering a metadata stanardization system robust to label noise. Such a system can be used to standardize MRI metadata and therefore reduce radiologist workload. Future work should investigate class conditional label noise.

Authors

Publication Details

Journal
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Published
2024-11-26
DOI
https://doi.org/10.58530/2024/1763
Primary Topic
Machine Learning and Data Classification
Type
article
Field-Weighted Citation Impact
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article

Pretraining using masked language modeling improves label noise robustness on the metadata standardization task

Ryan Chamberlain, Ben A. Duffy
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Machine Learning and Data Classification
article

Pretraining using masked language modeling improves label noise robustness on the metadata standardization task

Ryan Chamberlain, Ben A. Duffy
article en

Abstract

Motivation: The lack of standardization in MRI metadata increases radiologist workload. Goal(s): To demonstrate an approach to standardize the image contrast and the body part examined information in the DICOM header and to understand the benefits of self-supervised pretraining on the metadata standardization task in the presence of label noise. Approach: Masked language modeling was used for pretraining. At the fine-tuning stage, a transformer model was used to predict the image contrast and body part from both the text and numerical DICOM tags. Results: Pretraining improves robustness to label noise, with there being no loss in performance at 20% label noise. Impact: Pretraining using masked language modeling is effective at rendering a metadata stanardization system robust to label noise. Such a system can be used to standardize MRI metadata and therefore reduce radiologist workload. Future work should investigate class conditional label noise.

Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Quality Education
Openalex Percentile: Top 81%
Machine Learning and Data Classification
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Pretraining using masked language modeling improves label noise robustness on the metadata standardization task — Ryan Chamberlain, Ben A. Duffy · Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition (2024) | TGRS Research Map | TGRS