Optimally-truncated SVD and PCA applied to spatio-temporal hyperpolarized 13C cardiac data

Motivation: Current hyperpolarized data analysis techniques, first validated for interrogating cancer, are now being utilized for HP 13C cardiac MRI which is metabolically diverse. Goal(s): Our goal was to explore the viability of applying advanced data analysis techniques to previously acquired HP 13C cardiac data to derive novel and potentially impactful information. Approach: We applied optimally-truncated SVD based PCA to fasted and fed state [1-13C] pyruvate images and k-means clustering on resulting data. Results: Low-rank (r=3) PCA results captured sufficient data to represent the pyruvate images and identify plausible separable components of interest. Clustering spatially resolving data sufficiently for potential further constrained analyses. Impact: Hyperpolarized 13C cardiac MRI can be analyzed using PCA to derive novel and potentially impactful voxel-wise analysis. As use of HP 13C MRI expands to new applications, advanced analysis techniques can be utilized to better characterize complex alterations in metabolism.

Authors

Publication Details

Journal
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Published
2024-11-26
DOI
https://doi.org/10.58530/2024/1867
Primary Topic
Advanced NMR Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00
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article

Optimally-truncated SVD and PCA applied to spatio-temporal hyperpolarized 13C cardiac data

Avantika Sinha, Peder E. Z. Larson, Roselle Abraham, Anna Bennett et al.
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Advanced NMR Techniques and Applications
article

Optimally-truncated SVD and PCA applied to spatio-temporal hyperpolarized 13C cardiac data

Avantika Sinha, Peder E. Z. Larson, Roselle Abraham, Anna Bennett, Hayden Shinn
article en

Abstract

Motivation: Current hyperpolarized data analysis techniques, first validated for interrogating cancer, are now being utilized for HP 13C cardiac MRI which is metabolically diverse. Goal(s): Our goal was to explore the viability of applying advanced data analysis techniques to previously acquired HP 13C cardiac data to derive novel and potentially impactful information. Approach: We applied optimally-truncated SVD based PCA to fasted and fed state [1-13C] pyruvate images and k-means clustering on resulting data. Results: Low-rank (r=3) PCA results captured sufficient data to represent the pyruvate images and identify plausible separable components of interest. Clustering spatially resolving data sufficiently for potential further constrained analyses. Impact: Hyperpolarized 13C cardiac MRI can be analyzed using PCA to derive novel and potentially impactful voxel-wise analysis. As use of HP 13C MRI expands to new applications, advanced analysis techniques can be utilized to better characterize complex alterations in metabolism.

Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Openalex Percentile: Top 84%
Advanced NMR Techniques and Applications
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Optimally-truncated SVD and PCA applied to spatio-temporal hyperpolarized 13C cardiac data — Avantika Sinha, Peder E. Z. Larson, et al. · Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition (2024) | TGRS Research Map | TGRS