Generative AI for Rapid Diffusion MRI with Improved Image Quality, Reliability and Generalizability

Motivation: Long scan times limit the clinical usage of diffusion MRI (dMRI)Goal(s): We aim to perform rapid dMRI with high accuracy and reproducibilityApproach: We employ a Swin UNEt Transformers (Swin) model, trained on Human Connectome Project data and conditioned on registered T1 scans, to perform generalized dMRI denoising and super-resolution, requiring only 90 seconds of scan time. Results: Compared with state-of-the-art self-supervised methods, the fully-supervised Swin UNETR achieved higher accuracy on external out-of-domain (OOD) datasets and exhibited 50% lower coefficient-of-variation for intracellular volume fraction and free water fraction measurements. Fine-tuning on even a single example scan improved performance. Impact: Our approach achieves unprecedented accuracy and reproducibility in dMRI datasets acquired in different patient populations using different scanner models and pulse sequences and will enable much shorter dMRI scan times for patients unable to cooperate with lengthy imaging protocols.

Authors

Publication Details

Journal
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Published
2024-11-26
DOI
https://doi.org/10.58530/2024/2415
Primary Topic
Advanced Neuroimaging Techniques and Applications
Type
article
Field-Weighted Citation Impact
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article

Generative AI for Rapid Diffusion MRI with Improved Image Quality, Reliability and Generalizability

Hannah Choi, Pratik Mukherjee, Amir Sadikov, Lanya T. Cai et al.
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Advanced Neuroimaging Techniques and Applications
article

Generative AI for Rapid Diffusion MRI with Improved Image Quality, Reliability and Generalizability

Hannah Choi, Pratik Mukherjee, Amir Sadikov, Lanya T. Cai, Xiang Pan
article en

Abstract

Motivation: Long scan times limit the clinical usage of diffusion MRI (dMRI)Goal(s): We aim to perform rapid dMRI with high accuracy and reproducibilityApproach: We employ a Swin UNEt Transformers (Swin) model, trained on Human Connectome Project data and conditioned on registered T1 scans, to perform generalized dMRI denoising and super-resolution, requiring only 90 seconds of scan time. Results: Compared with state-of-the-art self-supervised methods, the fully-supervised Swin UNETR achieved higher accuracy on external out-of-domain (OOD) datasets and exhibited 50% lower coefficient-of-variation for intracellular volume fraction and free water fraction measurements. Fine-tuning on even a single example scan improved performance. Impact: Our approach achieves unprecedented accuracy and reproducibility in dMRI datasets acquired in different patient populations using different scanner models and pulse sequences and will enable much shorter dMRI scan times for patients unable to cooperate with lengthy imaging protocols.

Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Clean water and sanitation
Openalex Percentile: Top 65%
Advanced Neuroimaging Techniques and Applications
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Generative AI for Rapid Diffusion MRI with Improved Image Quality, Reliability and Generalizability — Hannah Choi, Pratik Mukherjee, et al. · Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition (2024) | TGRS Research Map | TGRS