Potent and Selective Human 5-HT<sub>2B</sub> Serotonin Receptor Antagonists: 4′-Cyano-(N)-methanocarba-adenosines by Synthetic Serendipity

Rigidified nucleoside derivatives with (N)-methanocarba replacement of ribose have been repurposed as peripheral subtype-selective 5-HT<sub>2B</sub> serotonin receptor antagonists for heart and lung fibrosis and intestinal/vascular conditions. 4'-Cyano derivative <b>40</b> (MRS8209; <i>K<sub>i</sub></i>, 4.27 nM) was 47-fold (human binding, but not rat and mouse) and 724-fold (functionally) selective at 5-HT<sub>2B</sub>R, compared to antitarget 5-HT<sub>2C</sub>R, and predicted to form a stable receptor complex using docking and molecular dynamics. 4'-Cyano substituents enhanced 5-HT<sub>2B</sub>R affinity (typically 4-5-fold compared to 4'-CH<sub>2</sub>OH), depending on an <i>N</i><sup>6</sup> group larger than methyl. Asymmetric <i>N</i><sup>6</sup> groups (4'-cyano-2-halo derivatives <b>33</b>-<b>35</b> and <b>37</b>) provided potent 5-HT<sub>2B</sub>R <i>K<sub>i</sub></i> values (7-22 nM). A 4'-CH<sub>2</sub>CN substituent was less effective than 4'-CN at increasing 5-HT<sub>2B</sub>R affinity, while a 4'-CHF<sub>2</sub> group produced high 5-HT<sub>2B</sub> affinity/selectivity. A 2-benzylthio-adenine group with unsubstituted 6-NH<sub>2</sub> shifted the typical selectivity pattern toward potent 5-HT<sub>2C</sub> binding. Thus, the SAR suggests that <i>N</i><sup>6</sup>-cyclopentyl-4'-cyano modifications are promising, with an interdependence among the substituent positions.

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Publication Details

Journal
Journal of Medicinal Chemistry
Published
2024-11-26
DOI
https://doi.org/10.1021/acs.jmedchem.4c02174
Citations
7
Primary Topic
Adenosine and Purinergic Signaling
Type
article
Field-Weighted Citation Impact
2.82

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article

Potent and Selective Human 5-HT2B Serotonin Receptor Antagonists: 4′-Cyano-(N)-methanocarba-adenosines by Synthetic Serendipity

Ian M. Levitan, Jane W. Lammers, Dilip K. Tosh, Ryan G. Campbell et al.
7 citations
Journal of Medicinal Chemistry
Adenosine and Purinergic Signaling
2.82
article

Potent and Selective Human 5-HT2B Serotonin Receptor Antagonists: 4′-Cyano-(N)-methanocarba-adenosines by Synthetic Serendipity

Ian M. Levitan, Jane W. Lammers, Dilip K. Tosh, Ryan G. Campbell, Hailey A. Bock, John D. McCorvy, Matteo Pavan, Silvia Sgambellone, Sarah A. Lewicki, Serafina Villano, Zhan-Guo Gao, Laura Lucarini, Marko Ivancich, Tamar Demby, Silvia Marri, Naili Liu, Kenneth A. Jacobson, Jihyun Lee, Eric Yu Hai Chen, Oksana Gavrilova, S.J. Choi, A. Clark
article en
7 citations

Abstract

Rigidified nucleoside derivatives with (N)-methanocarba replacement of ribose have been repurposed as peripheral subtype-selective 5-HT<sub>2B</sub> serotonin receptor antagonists for heart and lung fibrosis and intestinal/vascular conditions. 4'-Cyano derivative <b>40</b> (MRS8209; <i>K<sub>i</sub></i>, 4.27 nM) was 47-fold (human binding, but not rat and mouse) and 724-fold (functionally) selective at 5-HT<sub>2B</sub>R, compared to antitarget 5-HT<sub>2C</sub>R, and predicted to form a stable receptor complex using docking and molecular dynamics. 4'-Cyano substituents enhanced 5-HT<sub>2B</sub>R affinity (typically 4-5-fold compared to 4'-CH<sub>2</sub>OH), depending on an <i>N</i><sup>6</sup> group larger than methyl. Asymmetric <i>N</i><sup>6</sup> groups (4'-cyano-2-halo derivatives <b>33</b>-<b>35</b> and <b>37</b>) provided potent 5-HT<sub>2B</sub>R <i>K<sub>i</sub></i> values (7-22 nM). A 4'-CH<sub>2</sub>CN substituent was less effective than 4'-CN at increasing 5-HT<sub>2B</sub>R affinity, while a 4'-CHF<sub>2</sub> group produced high 5-HT<sub>2B</sub> affinity/selectivity. A 2-benzylthio-adenine group with unsubstituted 6-NH<sub>2</sub> shifted the typical selectivity pattern toward potent 5-HT<sub>2C</sub> binding. Thus, the SAR suggests that <i>N</i><sup>6</sup>-cyclopentyl-4'-cyano modifications are promising, with an interdependence among the substituent positions.

Journal of Medicinal ChemistryVol. 67(23)
National Institutes of Health (US), Medical College of Wisconsin (US), National Institute of Diabetes and Digestive and Kidney Diseases (US), University of Florence (IT)
Università degli Studi di Firenze, National Institutes of Health, National Institute of Mental Health, National Institute of Diabetes and Digestive and Kidney Diseases
Zero hunger
Openalex Percentile: Top 10%
Adenosine and Purinergic Signaling
2.82
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