Macrocyclic Bridgehead Fluorophores, Pyrrolyl-diazabicyclo[8.3.1]tetradecadienones, with Giant Stokes Shifts

A previously unknown class of fluorophores was discovered, which represents 14-membered bridgehead heterocycles, pyrrolyl-diazabicyclo[8.3.1]tetradecadienones, herein referred to as PY-14-ONEs. The new fluorophores are characterized by giant Stokes shifts of ∼8000-10,250 cm<sup>-1</sup> and virtually zero overlap of the absorption and emission bands. They exhibit fluorescence maxima in the blue-green region (454 ≤ λ<sub>em</sub> ≤ 513 nm, MeCN), which shift to the red side when converted to their water-soluble salts by alkylation with MeI (478 ≤ λ<sub>em</sub> ≤ 516 nm, water). PY-14-ONEs were obtained by an original synthesis from DBU, 1,8-diazabicyclo[5.4.0]undec-7-ene, which reacts with acylethynylpyrroles without catalysts under mild conditions to afford PY-14-ONEs in a 34-58% yield. The reaction represents a ring expansion of DBU. Since acylethynylpyrroles are readily available, the discovered reaction opens promising possibilities for the development of new fluorophores. The results of our time-dependent DFT calculations indicate that the pyrrole ring in PY-14-ONEs plays an important role in the formation of the Stokes shifts, which can be further enhanced by attaching appropriate substituents to it, capable of creating in S<sub>1</sub> an extended conjugated system and causing a substantial alternation of the molecular structure via its planarization.

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Publication Details

Journal
The Journal of Organic Chemistry
Published
2024-11-26
DOI
https://doi.org/10.1021/acs.joc.4c02002
Citations
5
Primary Topic
Porphyrin and Phthalocyanine Chemistry
Type
article
Field-Weighted Citation Impact
0.59

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article

Macrocyclic Bridgehead Fluorophores, Pyrrolyl-diazabicyclo[8.3.1]tetradecadienones, with Giant Stokes Shifts

А. Б. Трофимов, Ludmila A. Oparina, Elena G. Martyanova, Alexandra M. Belogolova et al.
5 citations
The Journal of Organic Chemistry
Porphyrin and Phthalocyanine Chemistry
0.59
article

Macrocyclic Bridgehead Fluorophores, Pyrrolyl-diazabicyclo[8.3.1]tetradecadienones, with Giant Stokes Shifts

А. Б. Трофимов, Ludmila A. Oparina, Elena G. Martyanova, Alexandra M. Belogolova, Konstantin B. Petrushenko, Igor А. Ushakov, Denis N. Tomilin, Б. А. Трофимов, Elena F. Sagitova, О. В. Петрова, Денис В. Корчагин, Lyubov N. Sobenina, В. Ф. Разумов
article en
5 citations

Abstract

A previously unknown class of fluorophores was discovered, which represents 14-membered bridgehead heterocycles, pyrrolyl-diazabicyclo[8.3.1]tetradecadienones, herein referred to as PY-14-ONEs. The new fluorophores are characterized by giant Stokes shifts of ∼8000-10,250 cm<sup>-1</sup> and virtually zero overlap of the absorption and emission bands. They exhibit fluorescence maxima in the blue-green region (454 ≤ λ<sub>em</sub> ≤ 513 nm, MeCN), which shift to the red side when converted to their water-soluble salts by alkylation with MeI (478 ≤ λ<sub>em</sub> ≤ 516 nm, water). PY-14-ONEs were obtained by an original synthesis from DBU, 1,8-diazabicyclo[5.4.0]undec-7-ene, which reacts with acylethynylpyrroles without catalysts under mild conditions to afford PY-14-ONEs in a 34-58% yield. The reaction represents a ring expansion of DBU. Since acylethynylpyrroles are readily available, the discovered reaction opens promising possibilities for the development of new fluorophores. The results of our time-dependent DFT calculations indicate that the pyrrole ring in PY-14-ONEs plays an important role in the formation of the Stokes shifts, which can be further enhanced by attaching appropriate substituents to it, capable of creating in S<sub>1</sub> an extended conjugated system and causing a substantial alternation of the molecular structure via its planarization.

The Journal of Organic ChemistryVol. 89(24)
A.E. Favorsky Irkutsk Institute of Chemistry (RU), Institute of Problems of Chemical Physics (RU), Irkutsk State University (RU)
Ministry of Science and Higher Education of the Russian Federation
Openalex Percentile: Top 33%
Porphyrin and Phthalocyanine Chemistry
0.59
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