Transcriptomic data of peach varieties with different chilling requirement levels
We extracted and sequenced the RNA of different CR peach buds at the same status in three endodormancy stages. Each stages have three biological replicates. A total of 18 RNA-seq libraries were obtained and mapped to the reference genome after quality control. The gene expression level was normalized by two methods (TPM and FPKM). Differentially expressed genes (DEGs) analysis revealed that a total of 2,481 unique genes with an absolute value of log2 fold change (FC) greater than 1.0. Homologous functional annotation of these DEGs were conducted which provided further information for CR potential related genes identified and functional genomics studies.
Authors
- Haiyan Li (ORCID: https://orcid.org/0000-0002-4667-1294)
- Weihan Zhang (ORCID: https://orcid.org/0000-0002-8389-3881)
- Yuepeng Han (ORCID: https://orcid.org/0000-0003-3183-8095)
- Liao Liao (ORCID: https://orcid.org/0000-0002-8434-7401)
- Yue Sun (ORCID: https://orcid.org/0000-0001-6348-4549)
- Baoxiong Wan
Institutions
- Chinese Academy of Sciences (CN)
- Guangxi Academy of Special Crops (CN)
- Shanghai Zhangjiang Laboratory (CN)
- Wuhan Botanical Garden (CN)
- University of Chinese Academy of Sciences (CN)
Publication Details
- Journal
- BMC Genomic Data
- Published
- 2024-11-26
- DOI
- https://doi.org/10.1186/s12863-024-01279-x
- Citations
- 2
- Primary Topic
- Plant Physiology and Cultivation Studies
- Type
- article
- Field-Weighted Citation Impact
- 1.20