<i>lefser</i>: implementation of metagenomic biomarker discovery tool, <i>LEfSe</i>, in R
Our software, lefser, is distributed through the Bioconductor project (https://www.bioconductor.org/packages/release/bioc/html/lefser.html), and all the source code is available in the GitHub repository https://github.com/waldronlab/lefser.
Authors
- Marcel Ramos (ORCID: https://orcid.org/0000-0002-6155-3245)
- Sehyun Oh (ORCID: https://orcid.org/0000-0002-9490-3061)
- Asya Khleborodova
- Samuel David Gamboa-Tuz (ORCID: https://orcid.org/0000-0002-6863-7943)
- Nicola Segata (ORCID: https://orcid.org/0000-0002-1583-5794)
- Levi Waldron
Institutions
- City University of New York (US)
- University of Trento (IT)
- Institute of Population and Public Health (CA)
- Istituti di Ricovero e Cura a Carattere Scientifico (IT)
- European Institute of Oncology (IT)
Publication Details
- Journal
- Bioinformatics
- Published
- 2024-11-25
- DOI
- https://doi.org/10.1093/bioinformatics/btae707
- Citations
- 35
- Primary Topic
- Gene expression and cancer classification
- Type
- article
- Field-Weighted Citation Impact
- 8.18
Funders
- National Institutes of Health
- National Cancer Institute