Studying Rare Movement Disorders: From Whole-Exome Sequencing to New Diagnostic and Therapeutic Approaches in a Modern Genetic Clinic

<b>Background:</b> Rare movement disorders often have a genetic etiology. New technological advances have increased the odds of achieving genetic diagnoses: next-generation sequencing (NGS) (whole-exome sequencing-WES; whole-genome sequencing-WGS) and long-read sequencing (LRS). In 2017, we launched a WES program for patients with rare movement disorders of suspected genetic etiology. We aim to describe the accumulated experience of a modern movement disorder genetic clinic, highlighting how different available genetic tests might be prioritized according to the clinical phenotype and pattern of inheritance. <b>Methods:</b> Participants were studied through WES analysis. Descriptive statistics, including the mean, standard deviation, counts, and percentages, were used to summarize demographic and clinical characteristics in all subjects and with each type of result [pathogenic or likely pathogenic, variants of uncertain significance (VUS), negative]. <b>Results:</b> We studied 88 patients (93.2% Caucasian, 5.72% African American, and 1.08% Hispanic or Latino). After excluding six family members from four index participants, the diagnostic yield of WES reached 27% (22/82 probands). The age at onset was significantly lower in patients with pathogenic/likely pathogenic variants. The most common clinical phenotypes were ataxia and parkinsonism. Dystonia, ataxia, leukoencephalopathy, and parkinsonism were associated with most genetic diagnoses. <b>Conclusions:</b> We propose a comprehensive protocol with decision tree testing for WGS and LRS, a return of results, and a re-analysis of inconclusive genetic data to increase the diagnostic yield of patients with rare neurogenetic disorders.

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Journal
Biomedicines
Published
2024-11-23
DOI
https://doi.org/10.3390/biomedicines12122673
Primary Topic
Genomics and Rare Diseases
Type
article
Field-Weighted Citation Impact
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article

Studying Rare Movement Disorders: From Whole-Exome Sequencing to New Diagnostic and Therapeutic Approaches in a Modern Genetic Clinic

Hassan Chaı̈b, Nathaly Olga Chinchihualpa Paredes, Josefina Pérez Maturo, Andrew P. Duker et al.
Biomedicines
Genomics and Rare Diseases
article

Studying Rare Movement Disorders: From Whole-Exome Sequencing to New Diagnostic and Therapeutic Approaches in a Modern Genetic Clinic

Hassan Chaı̈b, Nathaly Olga Chinchihualpa Paredes, Josefina Pérez Maturo, Andrew P. Duker, M. Leonor Bustamante, Jesus Thomas Abanto, Marcelo Kauffman, Michael R. Dixon, Alberto J. Espay, Luca Marsili, Kevin R. Duque, Michael W. Pauciulo, Emily J. Hill, Kathleen Collins, Marcelo Miranda
article en

Abstract

<b>Background:</b> Rare movement disorders often have a genetic etiology. New technological advances have increased the odds of achieving genetic diagnoses: next-generation sequencing (NGS) (whole-exome sequencing-WES; whole-genome sequencing-WGS) and long-read sequencing (LRS). In 2017, we launched a WES program for patients with rare movement disorders of suspected genetic etiology. We aim to describe the accumulated experience of a modern movement disorder genetic clinic, highlighting how different available genetic tests might be prioritized according to the clinical phenotype and pattern of inheritance. <b>Methods:</b> Participants were studied through WES analysis. Descriptive statistics, including the mean, standard deviation, counts, and percentages, were used to summarize demographic and clinical characteristics in all subjects and with each type of result [pathogenic or likely pathogenic, variants of uncertain significance (VUS), negative]. <b>Results:</b> We studied 88 patients (93.2% Caucasian, 5.72% African American, and 1.08% Hispanic or Latino). After excluding six family members from four index participants, the diagnostic yield of WES reached 27% (22/82 probands). The age at onset was significantly lower in patients with pathogenic/likely pathogenic variants. The most common clinical phenotypes were ataxia and parkinsonism. Dystonia, ataxia, leukoencephalopathy, and parkinsonism were associated with most genetic diagnoses. <b>Conclusions:</b> We propose a comprehensive protocol with decision tree testing for WGS and LRS, a return of results, and a re-analysis of inconclusive genetic data to increase the diagnostic yield of patients with rare neurogenetic disorders.

BiomedicinesVol. 12(12)
Cincinnati Children's Hospital Medical Center (US), Consejo Nacional de Investigaciones Científicas y Técnicas (AR), Austral University (AR), Fundación Chile (CL), Hospital Ramos Mejía (AR), Clínica MEDS (Chile) (CL), University of Cincinnati (US), University of Chile (CL), University of Cincinnati Medical Center (US)
Cincinnati Children's Hospital Medical Center
Openalex Percentile: Top 76%
Genomics and Rare Diseases
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