High-affinity agonists reveal recognition motifs for the MRGPRD GPCR
The human MRGPRD protein is a member of the Mas-related G protein-coupled receptors (MRGPRs) that is involved in the sensing of pain, itch, and other inflammatory stimuli. As with other MRGPRs, MRGPRD is a relatively understudied receptor with few known agonists. The most potent small-molecule agonist of MRGPRD reported so far is β-alanine, with an affinity in the micromole range, which largely restricts its functional study. Here, we report two MRGPRD agonists, EP-2825 and EP-3945, that are approximately 100-fold more potent than β-alanine and determine the structures of MRGPRD-Gq in complex with EP-2825 and EP-3945, respectively. The structures reveal distinct agonist binding modes of MRGPRD and large conformational plasticity of the orthosteric pocket. Collectively, the discovery of high-affinity MRGPRD agonists and their distinct binding modes will facilitate the functional study and the structure-based design of ligands targeting this understudied receptor.
Authors
- Richard Pittner
- Bryan L. Roth (ORCID: https://orcid.org/0000-0002-0561-6520)
- Isha Singh (ORCID: https://orcid.org/0000-0003-3612-5393)
- Brian K. Shoichet (ORCID: https://orcid.org/0000-0002-6098-7367)
- Can Cao (ORCID: https://orcid.org/0000-0001-6125-0837)
- Esther Martinborough
- Ryan H. Gumpper (ORCID: https://orcid.org/0000-0003-1309-3069)
- Adam Yeager
- Chunyu Wang (ORCID: https://orcid.org/0000-0001-5165-7959)
- Lisa Dvorak
- Chelsea DeLeon
- Jonathan F. Fay (ORCID: https://orcid.org/0000-0003-1822-2384)
- Marion Lanier (ORCID: https://orcid.org/0000-0001-5167-7263)
- B. Krumm (ORCID: https://orcid.org/0000-0001-6039-4767)
- Yongfeng Liu (ORCID: https://orcid.org/0000-0002-8649-7892)
- Shicheng Zhang (ORCID: https://orcid.org/0000-0002-5245-443X)
- Corinne Bacon
- Marcus F. Boehm
- Alain Baron
Institutions
- University of North Carolina at Chapel Hill (US)
- University of California, San Francisco (US)
- Ligand Pharmaceuticals (United States) (US)
- University of San Francisco (US)
Publication Details
- Journal
- Cell Reports
- Published
- 2024-11-23
- DOI
- https://doi.org/10.1016/j.celrep.2024.114942
- Citations
- 5
- Primary Topic
- Receptor Mechanisms and Signaling
- Type
- article
- Field-Weighted Citation Impact
- 1.17
Funders
- University of North Carolina
- Nvidia
- National Institutes of Health