Blood smear imagery dataset for malaria parasite detection: A case of Tanzania

Malaria is a major public health issue in many regions of Africa, including Tanzania. The Tanzania Malaria National Strategic Plan (2021-2025) emphasizes on high-quality testing services availability, high coverage of timely diagnosis of malaria, and availability of innovative diagnostic systems for effective detection, treatment and control of malaria. This would be achieved by employing state of the art technologies like Machine learning. However, Machine learning requires diverse dataset to work effectively and efficiently. Therefore, this paper presents blood smear imagery dataset that can be used by researchers to develop computer vision systems for malaria parasite detection. The imagery dataset were acquired by setting up a 40X-2500X Real 4 K compound microscope with a 4k SONY IMX334 sensor camera mounted to it in five health centres of Tanga region. Blood samples taken according to normal routine of diagnosing patients in health care, were stained using Giemsa reagent and examined under microscope. Following these procedures, the study collected and annotated Thick infected blood smear images ( <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML"><mml:mrow><mml:mi>n</mml:mi> <mml:mo>=</mml:mo> <mml:mn>1139</mml:mn> <mml:mo>)</mml:mo></mml:mrow> </mml:math> ; Thick uninfected blood smear images ( <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML"><mml:mrow><mml:mi>n</mml:mi> <mml:mo>=</mml:mo> <mml:mn>1071</mml:mn></mml:mrow> </mml:math> ); Thin uninfected blood smear images ( <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML"><mml:mrow><mml:mi>n</mml:mi> <mml:mo>=</mml:mo> <mml:mn>270</mml:mn></mml:mrow> </mml:math> ); and Thin infected blood smear images ( <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML"><mml:mrow><mml:mi>n</mml:mi> <mml:mo>=</mml:mo> <mml:mn>1064</mml:mn></mml:mrow> </mml:math> ). Furthermore, the curated dataset have been uploaded in a public Harvard data verse repository. In summary, the dataset aims to support the creation of diagnostic tools that improve malaria detection, thereby advancing health outcomes and aiding malaria control initiatives in Tanzania and other regions impacted by the disease.

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Publication Details

Journal
Data in Brief
Published
2024-11-23
DOI
https://doi.org/10.1016/j.dib.2024.111169
Citations
2
Primary Topic
Digital Imaging for Blood Diseases
Type
article
Field-Weighted Citation Impact
0.50

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article

Blood smear imagery dataset for malaria parasite detection: A case of Tanzania

Anael Sam, Beston Lufyagila, Bonny Mgawe
2 citations
Data in Brief
Digital Imaging for Blood Diseases
0.50
article

Blood smear imagery dataset for malaria parasite detection: A case of Tanzania

Anael Sam, Beston Lufyagila, Bonny Mgawe
article en
2 citations

Abstract

Malaria is a major public health issue in many regions of Africa, including Tanzania. The Tanzania Malaria National Strategic Plan (2021-2025) emphasizes on high-quality testing services availability, high coverage of timely diagnosis of malaria, and availability of innovative diagnostic systems for effective detection, treatment and control of malaria. This would be achieved by employing state of the art technologies like Machine learning. However, Machine learning requires diverse dataset to work effectively and efficiently. Therefore, this paper presents blood smear imagery dataset that can be used by researchers to develop computer vision systems for malaria parasite detection. The imagery dataset were acquired by setting up a 40X-2500X Real 4 K compound microscope with a 4k SONY IMX334 sensor camera mounted to it in five health centres of Tanga region. Blood samples taken according to normal routine of diagnosing patients in health care, were stained using Giemsa reagent and examined under microscope. Following these procedures, the study collected and annotated Thick infected blood smear images ( <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML"><mml:mrow><mml:mi>n</mml:mi> <mml:mo>=</mml:mo> <mml:mn>1139</mml:mn> <mml:mo>)</mml:mo></mml:mrow> </mml:math> ; Thick uninfected blood smear images ( <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML"><mml:mrow><mml:mi>n</mml:mi> <mml:mo>=</mml:mo> <mml:mn>1071</mml:mn></mml:mrow> </mml:math> ); Thin uninfected blood smear images ( <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML"><mml:mrow><mml:mi>n</mml:mi> <mml:mo>=</mml:mo> <mml:mn>270</mml:mn></mml:mrow> </mml:math> ); and Thin infected blood smear images ( <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML"><mml:mrow><mml:mi>n</mml:mi> <mml:mo>=</mml:mo> <mml:mn>1064</mml:mn></mml:mrow> </mml:math> ). Furthermore, the curated dataset have been uploaded in a public Harvard data verse repository. In summary, the dataset aims to support the creation of diagnostic tools that improve malaria detection, thereby advancing health outcomes and aiding malaria control initiatives in Tanzania and other regions impacted by the disease.

Data in BriefVol. 57
Mbeya University of Science and Technology (TZ), Nelson Mandela African Institution of Science and Technology (TZ)
Ministry of Education, Science and Technology
Openalex Percentile: Top 33%
Digital Imaging for Blood Diseases
0.50
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