Similarity between oxygen evolution in photosystem II and oxygen reduction in cytochrome c oxidase via proton coupled electron transfers. A unified view of the oxygenic life from four electron oxidation–reduction reactions

Basic concepts and theoretical foundations of broken symmetry (BS) and post BS methods for strongly correlated electron systems (SCES) such as electron-transfer (ET) diradical, multi-center polyradicals with spin frustration are described systematically to elucidate structures, bonding and reactivity of the high-valent transition metal oxo bonds in metalloenzymes: photosystem II (PSII) and cytochrome c oxidase (CcO). BS hybrid DFT (HDFT) and DLPNO coupled-cluster (CC) SD(T<sub>0</sub>) computations are performed to elucidate electronic and spin states of CaMn<sub>4</sub>O<sub>x</sub> cluster in the key step for oxygen evolution, namely S<sub>4</sub> [S<sub>3</sub> with Mn(IV) = O + Tyr161-O radical] state of PSII and P<sub>M</sub> [Fe(IV) = O + HO-Cu(II) + Tyr161-O radical] step for oxygen reduction in CcO. The cycle of water oxidation catalyzed by the CaMn<sub>4</sub>O<sub>x</sub> cluster in PSII and the cycle of oxygen reduction catalyzed by the Cu<sub>A</sub>-Fe<sub>a</sub>-Fe<sub>a3</sub>-Cu<sub>B</sub> cluster in CcO are examined on the theoretical grounds, elucidating similar concerted and/or stepwise proton transfer coupled electron transfer (PT-ET) processes for the four-electron oxidation in PSII and four-electron reduction in CcO. Interplay between theory and experiments have revealed that three electrons in the metal sites and one electron in tyrosine radical site are characteristic for PT-ET in these biological redox reaction systems, indicating no necessity of harmful Mn(V) = O and Fe(V) = O bonds with strong oxyl-radical character. Implications of the computational results are discussed in relation to design of artificial systems consisted of earth abundant transition metals for water oxidation.

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Journal
Photochemical & Photobiological Sciences
Published
2024-11-22
DOI
https://doi.org/10.1007/s43630-024-00648-w
Primary Topic
Photosynthetic Processes and Mechanisms
Type
article
Field-Weighted Citation Impact
0.00

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article

Similarity between oxygen evolution in photosystem II and oxygen reduction in cytochrome c oxidase via proton coupled electron transfers. A unified view of the oxygenic life from four electron oxidation–reduction reactions

Hiroshi Isobe, Kizashi Yamaguchi, Koichi Miyagawa, Mitsuo Shoji et al.
Photochemical & Photobiological Sciences
Photosynthetic Processes and Mechanisms
article

Similarity between oxygen evolution in photosystem II and oxygen reduction in cytochrome c oxidase via proton coupled electron transfers. A unified view of the oxygenic life from four electron oxidation–reduction reactions

Hiroshi Isobe, Kizashi Yamaguchi, Koichi Miyagawa, Mitsuo Shoji, Takashi Kawakami
article en

Abstract

Basic concepts and theoretical foundations of broken symmetry (BS) and post BS methods for strongly correlated electron systems (SCES) such as electron-transfer (ET) diradical, multi-center polyradicals with spin frustration are described systematically to elucidate structures, bonding and reactivity of the high-valent transition metal oxo bonds in metalloenzymes: photosystem II (PSII) and cytochrome c oxidase (CcO). BS hybrid DFT (HDFT) and DLPNO coupled-cluster (CC) SD(T<sub>0</sub>) computations are performed to elucidate electronic and spin states of CaMn<sub>4</sub>O<sub>x</sub> cluster in the key step for oxygen evolution, namely S<sub>4</sub> [S<sub>3</sub> with Mn(IV) = O + Tyr161-O radical] state of PSII and P<sub>M</sub> [Fe(IV) = O + HO-Cu(II) + Tyr161-O radical] step for oxygen reduction in CcO. The cycle of water oxidation catalyzed by the CaMn<sub>4</sub>O<sub>x</sub> cluster in PSII and the cycle of oxygen reduction catalyzed by the Cu<sub>A</sub>-Fe<sub>a</sub>-Fe<sub>a3</sub>-Cu<sub>B</sub> cluster in CcO are examined on the theoretical grounds, elucidating similar concerted and/or stepwise proton transfer coupled electron transfer (PT-ET) processes for the four-electron oxidation in PSII and four-electron reduction in CcO. Interplay between theory and experiments have revealed that three electrons in the metal sites and one electron in tyrosine radical site are characteristic for PT-ET in these biological redox reaction systems, indicating no necessity of harmful Mn(V) = O and Fe(V) = O bonds with strong oxyl-radical character. Implications of the computational results are discussed in relation to design of artificial systems consisted of earth abundant transition metals for water oxidation.

Photochemical & Photobiological SciencesVol. 23(12)
Okayama University of Science (JP), University of Tsukuba (JP), Sanken Electric (Japan) (JP), RIKEN Center for Computational Science (JP), The University of Osaka (JP)
Ministry of Education, Culture, Sports, Science and Technology, Osaka University, Japan Society for the Promotion of Science, RIKEN
Clean water and sanitation
Openalex Percentile: Top 81%
Photosynthetic Processes and Mechanisms
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