Dynamic Prediction of Survival Outcomes Using Longitudinal Biomarkers

Dynamic prediction estimates the survival probability, conditioned on a subject not yet experiencing the event of interest at a specific time point. To improve the accuracy of dynamic prediction, one can incorporate baseline measurements and biomarkers measured during a follow-up. In this review article, we focus on two predominant approaches: joint modeling and landmarking. Joint modeling specifies the joint distribution of the biomarkers and the event times. Landmarking originally utilizes only the biomarkers at the onset of the start time point of prediction, but recent versions have begun to incorporate data observed after the prediction time point. We illustrate how the two approaches predict the survival probability and subsequently demonstrate the application of these methods through a primary biliary cholangitis dataset with the R codes provided.

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Publication Details

Journal
Japanese Journal of Biometrics
Published
2024-11-21
DOI
https://doi.org/10.5691/jjb.45.189
Primary Topic
Machine Learning in Healthcare
Type
article
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article

Dynamic Prediction of Survival Outcomes Using Longitudinal Biomarkers

Koji Oba, Isao Yokota, Kentaro Sakamaki, Larbi Aluariachy
Japanese Journal of Biometrics
Machine Learning in Healthcare
article

Dynamic Prediction of Survival Outcomes Using Longitudinal Biomarkers

Koji Oba, Isao Yokota, Kentaro Sakamaki, Larbi Aluariachy
article en

Abstract

Dynamic prediction estimates the survival probability, conditioned on a subject not yet experiencing the event of interest at a specific time point. To improve the accuracy of dynamic prediction, one can incorporate baseline measurements and biomarkers measured during a follow-up. In this review article, we focus on two predominant approaches: joint modeling and landmarking. Joint modeling specifies the joint distribution of the biomarkers and the event times. Landmarking originally utilizes only the biomarkers at the onset of the start time point of prediction, but recent versions have begun to incorporate data observed after the prediction time point. We illustrate how the two approaches predict the survival probability and subsequently demonstrate the application of these methods through a primary biliary cholangitis dataset with the R codes provided.

Japanese Journal of BiometricsVol. 45(2)
Hokkaido University (JP), Juntendo University (JP), The University of Tokyo (JP), International University of Health and Welfare (JP)
Openalex Percentile: Top 81%
Machine Learning in Healthcare
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Dynamic Prediction of Survival Outcomes Using Longitudinal Biomarkers — Koji Oba, Isao Yokota, et al. · Japanese Journal of Biometrics (2024) | TGRS Research Map | TGRS