EDDINet: Enhancing drug–drug interaction prediction via information flow and consensus constrained multi-graph contrastive learning

Predicting drug-drug interactions (DDIs) is crucial for understanding and preventing adverse drug reactions (ADRs). However, most existing methods inadequately explore the interactive information between drugs in a self-supervised manner, limiting our comprehension of drug-drug associations. This paper introduces EDDINet: Enhancing Drug-Drug Interaction Prediction via Information Flow and Consensus-Constrained Multi-Graph Contrastive Learning for precise DDI prediction. We first present a cross-modal information-flow mechanism to integrate diverse drug features, enriching the structural insights conveyed by the drug feature vector. Next, we employ contrastive learning to filter various biological networks, enhancing the model's robustness. Additionally, we propose a consensus regularization framework that collaboratively trains multi-view models, producing high-quality drug representations. To unify drug representations derived from different biological information, we utilize an attention mechanism for DDI prediction. Extensive experiments demonstrate that EDDINet surpasses state-of-the-art unsupervised models and outperforms some supervised baseline models in DDI prediction tasks. Our approach shows significant advantages and holds promising potential for advancing DDI research and improving drug safety assessments. Our codes are available at: https://github.com/95LY/EDDINet_code.

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Publication Details

Journal
Artificial Intelligence in Medicine
Published
2024-11-20
DOI
https://doi.org/10.1016/j.artmed.2024.103029
Citations
6
Primary Topic
Computational Drug Discovery Methods
Type
article
Field-Weighted Citation Impact
2.17
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article

EDDINet: Enhancing drug–drug interaction prediction via information flow and consensus constrained multi-graph contrastive learning

Liang Cheng, Luhe Zhuang, Prayag Tiwari, Hong Wang et al.
6 citations
Artificial Intelligence in Medicine
Computational Drug Discovery Methods
2.17
article

EDDINet: Enhancing drug–drug interaction prediction via information flow and consensus constrained multi-graph contrastive learning

Liang Cheng, Luhe Zhuang, Prayag Tiwari, Hong Wang, Yijie Ding
article en
6 citations

Abstract

Predicting drug-drug interactions (DDIs) is crucial for understanding and preventing adverse drug reactions (ADRs). However, most existing methods inadequately explore the interactive information between drugs in a self-supervised manner, limiting our comprehension of drug-drug associations. This paper introduces EDDINet: Enhancing Drug-Drug Interaction Prediction via Information Flow and Consensus-Constrained Multi-Graph Contrastive Learning for precise DDI prediction. We first present a cross-modal information-flow mechanism to integrate diverse drug features, enriching the structural insights conveyed by the drug feature vector. Next, we employ contrastive learning to filter various biological networks, enhancing the model's robustness. Additionally, we propose a consensus regularization framework that collaboratively trains multi-view models, producing high-quality drug representations. To unify drug representations derived from different biological information, we utilize an attention mechanism for DDI prediction. Extensive experiments demonstrate that EDDINet surpasses state-of-the-art unsupervised models and outperforms some supervised baseline models in DDI prediction tasks. Our approach shows significant advantages and holds promising potential for advancing DDI research and improving drug safety assessments. Our codes are available at: https://github.com/95LY/EDDINet_code.

Artificial Intelligence in MedicineVol. 159
Shandong Normal University (CN), Quzhou University (CN), Halmstad University (SE)
Openalex Percentile: Top 11%
Computational Drug Discovery Methods
2.17
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EDDINet: Enhancing drug–drug interaction prediction via information flow and consensus constrained multi-graph contrastive learning — Liang Cheng, Luhe Zhuang, et al. · Artificial Intelligence in Medicine (2024) | TGRS Research Map | TGRS