Recent advances in stochastic simulation algorithms create opportunities to study new ecological and eco‐evolutionary problems

Incorporating stochasticity into ecological modeling is vital for understanding the structure and function of ecological systems, but stochasticity has been challenging to consistently introduce into foundational ecological theory. The Gillespie stochastic simulation algorithm (herein SSA) provides a key method to represent demographic stochasticity, but due to its foundational assumptions is inadequate for problems involving intra‐population variation and extrinsically/environmentally‐driven rapid changes in demographic rates. Two recent extensions to the SSA address these limitations: one augments the SSA with individual‐linked trait distributions that let us track trait changes across individuals and populations and the other introduces a methodological innovation to allow demographic rates to change between events; in four case studies we demonstrate the utility of these advances and highlight that simultaneously integrating both extensions into a single framework allows us to tackle a new class of ecological and evolutionary questions that have typically not been explored in continuous time modeling.

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Publication Details

Journal
Oikos
Published
2024-11-18
DOI
https://doi.org/10.1111/oik.11017
Citations
3
Primary Topic
Evolution and Genetic Dynamics
Type
article
Field-Weighted Citation Impact
1.65
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article

Recent advances in stochastic simulation algorithms create opportunities to study new ecological and eco‐evolutionary problems

David A. Vasseur, M. Kümmel
3 citations
Oikos
Evolution and Genetic Dynamics
1.65
article

Recent advances in stochastic simulation algorithms create opportunities to study new ecological and eco‐evolutionary problems

David A. Vasseur, M. Kümmel
article en
3 citations

Abstract

Incorporating stochasticity into ecological modeling is vital for understanding the structure and function of ecological systems, but stochasticity has been challenging to consistently introduce into foundational ecological theory. The Gillespie stochastic simulation algorithm (herein SSA) provides a key method to represent demographic stochasticity, but due to its foundational assumptions is inadequate for problems involving intra‐population variation and extrinsically/environmentally‐driven rapid changes in demographic rates. Two recent extensions to the SSA address these limitations: one augments the SSA with individual‐linked trait distributions that let us track trait changes across individuals and populations and the other introduces a methodological innovation to allow demographic rates to change between events; in four case studies we demonstrate the utility of these advances and highlight that simultaneously integrating both extensions into a single framework allows us to tackle a new class of ecological and evolutionary questions that have typically not been explored in continuous time modeling.

OikosVol. 2025(1)
Yale University (US)
Openalex Percentile: Top 14%
Evolution and Genetic Dynamics
1.65
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Recent advances in stochastic simulation algorithms create opportunities to study new ecological and eco‐evolutionary problems — David A. Vasseur, M. Kümmel · Oikos (2024) | TGRS Research Map | TGRS