Light-Driven Installation of Aminooxyhomolysine on Histones and Its Application for Synthesizing Stable and Site-Specific 3′-DNA–Histone Cross-Links

Histones react with various aldehyde-containing DNA modifications to form reversible but long-lived DNA-histone cross-links. The investigation of their biochemical effects and repair mechanisms has been impeded due to their reversibility and the lack of methods for synthesizing stable and structure-defined DNA-histone cross-links. Herein, we present a visible-light-driven strategy to install an aminooxyhomolysine on a histone at a defined position. Using this method, we synthesized a hydrolytically stable and site-specific 3'-DNA-histone cross-link derived from an abasic DNA lesion. Such an adduct can be efficiently repaired by proteolysis coupled with nuclease excision. This work provides a strategy that can be readily expanded to synthesize DNA-histone cross-links derived from other aldehyde-containing DNA modifications.

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Publication Details

Journal
Bioconjugate Chemistry
Published
2024-11-15
DOI
https://doi.org/10.1021/acs.bioconjchem.4c00453
Citations
2
Primary Topic
Advanced biosensing and bioanalysis techniques
Type
article
Field-Weighted Citation Impact
0.47

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article

Light-Driven Installation of Aminooxyhomolysine on Histones and Its Application for Synthesizing Stable and Site-Specific 3′-DNA–Histone Cross-Links

Ying Peng, Zhishuo Wang, Kun Yang, Y M Liu et al.
2 citations
Bioconjugate Chemistry
Advanced biosensing and bioanalysis techniques
0.47
article

Light-Driven Installation of Aminooxyhomolysine on Histones and Its Application for Synthesizing Stable and Site-Specific 3′-DNA–Histone Cross-Links

Ying Peng, Zhishuo Wang, Kun Yang, Y M Liu, Xiaoying Wei
article en
2 citations

Abstract

Histones react with various aldehyde-containing DNA modifications to form reversible but long-lived DNA-histone cross-links. The investigation of their biochemical effects and repair mechanisms has been impeded due to their reversibility and the lack of methods for synthesizing stable and structure-defined DNA-histone cross-links. Herein, we present a visible-light-driven strategy to install an aminooxyhomolysine on a histone at a defined position. Using this method, we synthesized a hydrolytically stable and site-specific 3'-DNA-histone cross-link derived from an abasic DNA lesion. Such an adduct can be efficiently repaired by proteolysis coupled with nuclease excision. This work provides a strategy that can be readily expanded to synthesize DNA-histone cross-links derived from other aldehyde-containing DNA modifications.

Bioconjugate ChemistryVol. 35(12)
The University of Texas at Austin (US)
University of Texas at Austin, National Institutes of Health, National Institute of General Medical Sciences
Openalex Percentile: Top 34%
Advanced biosensing and bioanalysis techniques
0.47
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Light-Driven Installation of Aminooxyhomolysine on Histones and Its Application for Synthesizing Stable and Site-Specific 3′-DNA–Histone Cross-Links — Ying Peng, Zhishuo Wang, et al. · Bioconjugate Chemistry (2024) | TGRS Research Map | TGRS