A protocol for in vivo RNA labeling and visualization in tobacco pollen tubes
Here, we present a protocol for labeling and live visualization of RNA-protein complexes in the form of ribonucleoprotein particles (RNPs) in tobacco pollen tubes. We describe steps for constructing RNA-pp7/MS2 tag and biolistic gene-gun-mediated pollen transformation. We then provide detailed procedures for RNA labeling using PP7 aptamer nascent RNA tagging and a fluorescently labeled Pseudomonas aeruginosa PP7 bacteriophage coat protein (PCP) reporter that binds to PP7 RNA stem loops. This protocol is adaptable to other cell types by employing tissue-specific promoters.
Authors
- Said Hafidh (ORCID: https://orcid.org/0000-0002-3970-713X)
- Vinod Kumar (ORCID: https://orcid.org/0000-0002-2537-1209)
Institutions
- Czech Academy of Sciences, Institute of Experimental Botany (CZ)
Publication Details
- Journal
- STAR Protocols
- Published
- 2024-11-15
- DOI
- https://doi.org/10.1016/j.xpro.2024.103433
- Citations
- 2
- Primary Topic
- Plant Reproductive Biology
- Type
- article
- Field-Weighted Citation Impact
- 0.47
Funders
- Ministerstvo Školství, Mládeže a Tělovýchovy
- Grantová Agentura České Republiky
- European Regional Development Fund