A pilot study to directly estimate radiation-induced mutation in large Japanese field mouse duo sample, mother and offspring, excluding unknown father, using ddRAD sequencing

DNA mutations are one of the effects of radiation exposure. A large amount of radioactive materials was released into the environment from the Fukushima Daiichi Nuclear Power Plant after a major earthquake and tsunami. Wild animals and plants living in highly radiation-contaminated areas are constantly exposed to high doses of radiation, and concerns occur about its effects on their health and the next generations. As a pilot study, double-digest restriction site-associated DNA (ddRAD) sequencing was conducted to assess the incidence of mutations in wild large Japanese field mice collected from the evacuation area. The optimal combination of restriction enzymes, encompassing the functionally important coding regions, was selected using in silico analysis. These enzymes were used for ddRAD sequence analysis of females and their fetuses to evaluate mutation rates. The results indicated that no significant differences were observed in mutation rates between mothers and fetuses in the study areas.