Dimensional analysis of diffusive association rate equations

Diffusive adsorption/association is a fundamental step in almost all chemical reactions in diluted solutions, such as organic synthesis, polymerization, self-assembly, biomolecular interactions, electrode dynamics, catalysis, chromatography, air and water environmental dynamics, and social and market dynamics. However, predicting the rate of such a reaction is challenging using the equations established over 100 years ago. Several orders of magnitude differences between the theoretical predictions and experimental measurements for various systems, from self-assembled monolayers to protein-protein aggregations, make such calculations meaningless in many situations. I believe the major problem is that the time-dependent evolution curve of Fick's gradient is an ideal assumption in most cases, and its slope is significantly overestimated. This paper digs into Fick's gradient problem for 3D cases and provides a solution using the single-molecule diffusion probability density function discretely.

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Publication Details

Journal
AIP Advances
Published
2024-11-01
DOI
https://doi.org/10.1063/5.0238119
Citations
1
Primary Topic
Molecular Junctions and Nanostructures
Type
article
Field-Weighted Citation Impact
0.21

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article

Dimensional analysis of diffusive association rate equations

Jixin Chen
1 citations
AIP Advances
Molecular Junctions and Nanostructures
0.21
article

Dimensional analysis of diffusive association rate equations

Jixin Chen
article en
1 citations

Abstract

Diffusive adsorption/association is a fundamental step in almost all chemical reactions in diluted solutions, such as organic synthesis, polymerization, self-assembly, biomolecular interactions, electrode dynamics, catalysis, chromatography, air and water environmental dynamics, and social and market dynamics. However, predicting the rate of such a reaction is challenging using the equations established over 100 years ago. Several orders of magnitude differences between the theoretical predictions and experimental measurements for various systems, from self-assembled monolayers to protein-protein aggregations, make such calculations meaningless in many situations. I believe the major problem is that the time-dependent evolution curve of Fick's gradient is an ideal assumption in most cases, and its slope is significantly overestimated. This paper digs into Fick's gradient problem for 3D cases and provides a solution using the single-molecule diffusion probability density function discretely.

AIP AdvancesVol. 14(11)
Ohio University (US)
National Institutes of Health, National Human Genome Research Institute
Clean water and sanitation
Openalex Percentile: Top 46%
Molecular Junctions and Nanostructures
0.21
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Dimensional analysis of diffusive association rate equations — Jixin Chen · AIP Advances (2024) | TGRS Research Map | TGRS