Differential gene expression analysis supports dysregulation of mitochondrial activity as a new perspective for glioblastoma's aggressiveness

Brain cancer is considered one of the most aggressive and lethal types of cancer, including primary tumors, being subdivided into milder forms such as low-grade gliomas and glioblastoma, considered the most aggressive form with higher invasion. Among the hallmarks of glioblastoma, the deregulation of mitochondrial metabolism has not yet been fully elucidated. Therefore, the search for mitochondrial biomarkers that can be used as indicators of the progression of this type of cancer is necessary. The aim of this study was to investigate the difference in gene expression between astrocytoma-type gliomas and glioblastomas, and how genes involved in mitochondrial metabolism can influence the proliferative cascade and be associated with tumor invasion. From the differential analysis of glioblastoma expression when compared to the milder form, 11 differentially expressed genes (DEGs) were found in our study, six of which were upregulated (<i>ATP5MGL, C15orf48, MCUB, TERT, AGXT</i> and <i>CYP27B1</i>) and four downregulated (<i>SLC2A4, GK2, SLC25A48, ETNPPL</i> and <i>HMGCS2</i>). To validate the findings, we used other independent bulk RNA-seq datasets and evaluated the number of normalized counts of the DEGs founded. Among these genes, we highlight that none of them had been reported in glioblastoma until this research, and we suggest these genes as possible biomarkers to be further explored, since they are associated with essential pathways for the tumor, such as glucose metabolization, gluconeogenesis, calcium and vitamin D metabolism, tumor progression and activation of the invasion cascade.

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Publication Details

Journal
Heliyon
Published
2024-11-01
DOI
https://doi.org/10.1016/j.heliyon.2024.e40414
Citations
4
Primary Topic
Glioma Diagnosis and Treatment
Type
article
Field-Weighted Citation Impact
1.75

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article

Differential gene expression analysis supports dysregulation of mitochondrial activity as a new perspective for glioblastoma's aggressiveness

Ricardo Cunha de Oliveira, Giovanna C. Cavalcante, Matheus Caetano Epifane-de-Assunção, Felipe Gouvêa de Souza et al.
4 citations
Heliyon
Glioma Diagnosis and Treatment
1.75
article

Differential gene expression analysis supports dysregulation of mitochondrial activity as a new perspective for glioblastoma's aggressiveness

Ricardo Cunha de Oliveira, Giovanna C. Cavalcante, Matheus Caetano Epifane-de-Assunção, Felipe Gouvêa de Souza, Ana Gabrielle Bispo
article en
4 citations

Abstract

Brain cancer is considered one of the most aggressive and lethal types of cancer, including primary tumors, being subdivided into milder forms such as low-grade gliomas and glioblastoma, considered the most aggressive form with higher invasion. Among the hallmarks of glioblastoma, the deregulation of mitochondrial metabolism has not yet been fully elucidated. Therefore, the search for mitochondrial biomarkers that can be used as indicators of the progression of this type of cancer is necessary. The aim of this study was to investigate the difference in gene expression between astrocytoma-type gliomas and glioblastomas, and how genes involved in mitochondrial metabolism can influence the proliferative cascade and be associated with tumor invasion. From the differential analysis of glioblastoma expression when compared to the milder form, 11 differentially expressed genes (DEGs) were found in our study, six of which were upregulated (<i>ATP5MGL, C15orf48, MCUB, TERT, AGXT</i> and <i>CYP27B1</i>) and four downregulated (<i>SLC2A4, GK2, SLC25A48, ETNPPL</i> and <i>HMGCS2</i>). To validate the findings, we used other independent bulk RNA-seq datasets and evaluated the number of normalized counts of the DEGs founded. Among these genes, we highlight that none of them had been reported in glioblastoma until this research, and we suggest these genes as possible biomarkers to be further explored, since they are associated with essential pathways for the tumor, such as glucose metabolization, gluconeogenesis, calcium and vitamin D metabolism, tumor progression and activation of the invasion cascade.

HeliyonVol. 10(22)
Universidade Federal do Pará (BR)
Fundação de Amparo à Pesquisa do Estado de São Paulo, Coordenação de Aperfeiçoamento de Pessoal de Nível Superior, Conselho Nacional de Desenvolvimento Científico e Tecnológico, Fundação Amazônia Paraense de Amparo à Pesquisa, Universidade Federal do Pará, Pró-Reitoria de Pesquisa e Pós-Graduação, Universidade Federal do Pará
Zero hunger
Openalex Percentile: Top 14%
Glioma Diagnosis and Treatment
1.75
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