Mitochondrial tRNAAsn, tRNACys and tRNATyr encoding genes mutations landscape in colorectal cancer patient

The colorectal cancer (CRC) is one of the significant diseases implicated in high mortality rates in the world. Multi factors contributed in the cancer development and progression like tRNA encoding genes which have been linked with colorectal cancer. The present study aimed to report Mitochondrial tRNAAsn, tRNACys and tRNATyr encoding genes mutations landscape in colorectal cancer patients. A case control design depended on using PCR-sequencing of mtDNA region consisting of three tRNA genes. Data analysis was implemented using multiple alignment seq, tRNA secondary structure construction and phylogenic tree construction. The results showed that one case (female) was 25 years old and cancer stage T3N1MX has shown 6 mutations in tRNAAsn and 3 mutations in both tRNACys and tRNATyr while other samples did not show variations in the patients and control groups. The secondary structure of varied tRNAAsn, tRNACys and tRNATyr in this case might have been affected. The phylogenetic tree showed the conservative sequence of all CRC patients except the case that has a single cluster. The present finding concluded that there was non-association between tRNAAsn, tRNACys and tRNATyr encoding genes in mtDNA with colorectal cancer. One patient has mutations in tRNAs that may be affected in tRNA secondary structure and may be contributed for cancer progression.