Intrinsically disordered regions and RNA binding domains contribute to protein enrichment in biomolecular condensates in Xenopus oocytes

Proteins containing both intrinsically disordered regions (IDRs) and RNA binding domains (RBDs) can phase separate in vitro, forming bodies similar to cellular biomolecular condensates. However, how IDR and RBD domains contribute to in vivo recruitment of proteins to biomolecular condensates remains poorly understood. Here, we analyzed the roles of IDRs and RBDs in L-bodies, biomolecular condensates present in Xenopus oocytes. We show that a cytoplasmic isoform of hnRNPAB, which contains two RBDs and an IDR, is highly enriched in L-bodies. While both of these domains contribute to hnRNPAB self-association and phase separation in vitro and mediate enrichment into L-bodies in oocytes, neither the RBDs nor the IDR replicate the localization of full-length hnRNPAB. Our results suggest a model where the combined effects of the IDR and RBDs regulate hnRNPAB partitioning into L-bodies. This model likely has widespread applications as proteins containing RBD and IDR domains are common biomolecular condensate residents.

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Publication Details

Journal
Scientific Reports
Published
2024-11-13
DOI
https://doi.org/10.1038/s41598-024-79409-9
Citations
2
Primary Topic
RNA Research and Splicing
Type
article
Field-Weighted Citation Impact
0.47

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article

Intrinsically disordered regions and RNA binding domains contribute to protein enrichment in biomolecular condensates in Xenopus oocytes

Mark C. Liang, Szu‐Huan Wang, Liam C. O’Connell, Victoria Johnson et al.
2 citations
Scientific Reports
RNA Research and Splicing
0.47
article

Intrinsically disordered regions and RNA binding domains contribute to protein enrichment in biomolecular condensates in Xenopus oocytes

Mark C. Liang, Szu‐Huan Wang, Liam C. O’Connell, Victoria Johnson, Kimberly L. Mowry, Nicolas Lux Fawzi, Jessica P. Otis, Anastasia C. Murthy, Anika K. Hutton
article en
2 citations

Abstract

Proteins containing both intrinsically disordered regions (IDRs) and RNA binding domains (RBDs) can phase separate in vitro, forming bodies similar to cellular biomolecular condensates. However, how IDR and RBD domains contribute to in vivo recruitment of proteins to biomolecular condensates remains poorly understood. Here, we analyzed the roles of IDRs and RBDs in L-bodies, biomolecular condensates present in Xenopus oocytes. We show that a cytoplasmic isoform of hnRNPAB, which contains two RBDs and an IDR, is highly enriched in L-bodies. While both of these domains contribute to hnRNPAB self-association and phase separation in vitro and mediate enrichment into L-bodies in oocytes, neither the RBDs nor the IDR replicate the localization of full-length hnRNPAB. Our results suggest a model where the combined effects of the IDR and RBDs regulate hnRNPAB partitioning into L-bodies. This model likely has widespread applications as proteins containing RBD and IDR domains are common biomolecular condensate residents.

Scientific ReportsVol. 14(1)
Brown University (US), Jnana Therapeutics (United States) (US), Massachusetts Institute of Technology (US)
National Institutes of Health
Zero hunger
Openalex Percentile: Top 34%
RNA Research and Splicing
0.47
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Intrinsically disordered regions and RNA binding domains contribute to protein enrichment in biomolecular condensates in Xenopus oocytes — Mark C. Liang, Szu‐Huan Wang, et al. · Scientific Reports (2024) | TGRS Research Map | TGRS