Chromosome-level genome assembly of the cave leech Sinospelaeobdella cavatuses (Hirudinea: Haemadipsidae)
Leeches are famous for their high medical value and wide environmental adaptability. Among them, cave leeches are a very fascinating and rare group, which is an important component in the study of adaptive evolution of leeches. However, no study has yet reported a reference genome for this group. In this study, we assembled a high-quality chromosome-level genome of the cave terrestrial leech Sinospelaeobdella cavatuses, through Illumina and PacBio sequencing, alongside chromosome conformation capture techniques. The resulting genome spans 153.67 Mb across 9 pseudochromosomes(range: 11.33 to 23.53 Mb), with a mounting rate of up to 95.37% and features an N50 length of 17.15 Mb. This genome is composed of 35.16% repetitive elements and contains 21180 predicted protein-coding genes. Decoding the S. cavatuses genome not only promotes future studies on study of its phylogeny, evolution, and behavior, but also provides valuable resources for in-depth investigation on adaptive evolution of leech.
Authors
- De‐Long Guan (ORCID: https://orcid.org/0000-0001-6866-0943)
- Tao Jiang (ORCID: https://orcid.org/0000-0002-0673-8503)
- Lulu Yang (ORCID: https://orcid.org/0000-0002-3979-2522)
- Yao Binbin (ORCID: https://orcid.org/0000-0003-1496-4380)
- Muhammad Salabat Khan (ORCID: https://orcid.org/0000-0002-5740-2516)
- Sheng‐Quan Xu (ORCID: https://orcid.org/0000-0001-7630-632X)
- Lu Zhao (ORCID: https://orcid.org/0000-0001-7528-4034)
Institutions
- Hechi University (CN)
- Shaanxi Normal University (CN)
Publication Details
- Journal
- Scientific Data
- Published
- 2024-11-13
- DOI
- https://doi.org/10.1038/s41597-024-04007-3
- Citations
- 2
- Primary Topic
- Leech Biology and Applications
- Type
- article
- Field-Weighted Citation Impact
- 0.90