Complete genome characterization by nanopore sequencing of rotaviruses A, B, and C circulating on large-scale pig farms in Russia
The applied nanopore sequencing method successfully genotyped the RV isolates and additionally revealed co-circulated species. The study demonstrates high genetic variability of Russian RVA isolates in VP4/VP7 genes and phylogenetically describes local RVB and RVC. Complete characterization of genomic segments is a crucial methodology in tracing the rotavirus's evolution and evaluating interspecies transmissions.
Authors
- Anton Yuzhakov (ORCID: https://orcid.org/0000-0002-0426-9678)
- Alexey Gulyukin (ORCID: https://orcid.org/0000-0003-2160-4770)
- Nikita Krasnikov (ORCID: https://orcid.org/0000-0001-8148-3080)
- Aliper Ti (ORCID: https://orcid.org/0000-0003-2696-1363)
Institutions
- All-Russian Scientific Research Institute of Experimental Veterinary Sciences. Ya.R. Kovalenko (RU)
Publication Details
- Journal
- Virology Journal
- Published
- 2024-11-13
- DOI
- https://doi.org/10.1186/s12985-024-02567-9
- Citations
- 8
- Primary Topic
- Viral gastroenteritis research and epidemiology
- Type
- article
- Field-Weighted Citation Impact
- 3.11