Insights into the Functioning of the D-amino Acid Transaminase from <i>Haliscomenobacter Hydrossis</i> via a Structural and Spectral Analysis of its Complex with 3-Aminooxypropionic Acid
Pyridoxal 5'-phosphate-dependent enzymes play a crucial role in nitrogen metabolism. Carbonyl compounds, such as O-substituted hydroxylamines, stand out among numerous specific inhibitors of these enzymes, including those of practical importance, because they react with pyridoxal 5'-phosphate in the active site of the enzymes to form stable oximes. O-substituted hydroxylamines mimic the side group of amino acid substrates, thus providing highly potent and specific inhibition of the corresponding enzymes. The interaction between D-amino acid transaminase from bacterium <i>Haliscomenobacter hydrossis</i> and 3-aminooxypropionic acid was studied in the present work. The structural and spectral analyses of the complex of this transaminase with 3-aminooxypropionic acid allowed us to clarify some features of the organization and functioning of its active site and illustrate one of the mechanisms of inhibition by the specific substrate, D-glutamic acid.
Authors
- Alina K. Bakunova (ORCID: https://orcid.org/0000-0002-3884-3893)
- Alex R. Khomutov (ORCID: https://orcid.org/0000-0001-6833-7855)
- Ilya O. Matyuta (ORCID: https://orcid.org/0000-0002-6297-8392)
- Ekaterina Yu. Bezsudnova (ORCID: https://orcid.org/0000-0002-4954-7547)
- Vladimir O. Popov (ORCID: https://orcid.org/0000-0002-0133-7962)
- Konstantin M. Boyko (ORCID: https://orcid.org/0000-0001-8229-189X)
- A.Y. Nikolaeva (ORCID: https://orcid.org/0000-0003-4255-5170)
Institutions
- Engelhardt Institute of Molecular Biology (RU)
- Russian Academy of Sciences (RU)
- Lomonosov Moscow State University (RU)
- Kurchatov Institute (RU)
- A N Bach Institute of Biochemistry (RU)
- Moscow State University (TJ)
Publication Details
- Journal
- Acta Naturae
- Published
- 2024-11-12
- DOI
- https://doi.org/10.32607/actanaturae.27496
- Citations
- 1
- Primary Topic
- Enzyme Structure and Function
- Type
- article
- Field-Weighted Citation Impact
- 0.12