A novel colorimetric assay for the detection of urinary N1, N12-diacetylspermine, a known biomarker for colorectal cancer

Urinary N<sup>1</sup>, N<sup>12</sup>-diacetylspermine (DAS) is a known biomarker for colorectal cancer (CRC). However, DAS levels in both healthy and CRC patients' urine samples are extremely low and often challenging to quantify. Complex and expensive methods do exist to detect DAS in urine, but simpler, less expensive methods to detect DAS are needed, especially in low resource settings. Here we describe a highly efficient, fast, precise, and inexpensive colorimetric assay to detect low levels of DAS in human urine samples. We used recombinant diacetylspermine oxidase (rDAS Ox), expressed and extracted from E. coli, to oxidize DAS, producing three products including hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>). The level of DAS present, which correlates with H<sub>2</sub>O<sub>2</sub> levels, was measured using horseradish peroxidase (HRP), which together with H<sub>2</sub>O<sub>2</sub>, oxidized Amplex™ Red to produce the pink-colored resorufin. The concentration of resorufin is directly proportional to H<sub>2</sub>O<sub>2</sub> (and DAS) levels. As urine contains metabolites which interfere with these oxidation reactions, we developed a simple two column-based protocol using ion exchange resins to remove these compounds and concentrate the DAS. With this novel cleaning and concentrating method, DAS was concentrated 15 times (confirmed by nuclear magnetic resonance (NMR) spectroscopy) and <1 μM DAS could be detected. Correlation graphs of urine samples spiked with known DAS concentrations versus assay-determined DAS concentrations had high coefficients of determination (R<sup>2</sup>) for 0-10 μM DAS (0.94) and for 0-1 μM DAS (0.91), clearly demonstrating the excellent performance of the two-column protocol with the rDAS Ox reaction mixture. To the best of our knowledge, this is first reported colorimetric enzymatic assay that quantitates DAS in urine.

Authors

Institutions

Publication Details

Journal
Analytical Biochemistry
Published
2024-11-12
DOI
https://doi.org/10.1016/j.ab.2024.115717
Citations
2
Primary Topic
Polyamine Metabolism and Applications
Type
article
Field-Weighted Citation Impact
0.47
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A novel colorimetric assay for the detection of urinary N1, N12-diacetylspermine, a known biomarker for colorectal cancer

Dipanjan Bhattacharyya, David S. Wishart, Song Huang, Marcia LeVatte et al.
2 citations
Analytical Biochemistry
Polyamine Metabolism and Applications
0.47
article

A novel colorimetric assay for the detection of urinary N1, N12-diacetylspermine, a known biomarker for colorectal cancer

Dipanjan Bhattacharyya, David S. Wishart, Song Huang, Marcia LeVatte, Karim Mezhoud, Upasana Singh, Anne Sieben, Saira Ali, Fleur Issac
article en
2 citations

Abstract

Urinary N<sup>1</sup>, N<sup>12</sup>-diacetylspermine (DAS) is a known biomarker for colorectal cancer (CRC). However, DAS levels in both healthy and CRC patients' urine samples are extremely low and often challenging to quantify. Complex and expensive methods do exist to detect DAS in urine, but simpler, less expensive methods to detect DAS are needed, especially in low resource settings. Here we describe a highly efficient, fast, precise, and inexpensive colorimetric assay to detect low levels of DAS in human urine samples. We used recombinant diacetylspermine oxidase (rDAS Ox), expressed and extracted from E. coli, to oxidize DAS, producing three products including hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>). The level of DAS present, which correlates with H<sub>2</sub>O<sub>2</sub> levels, was measured using horseradish peroxidase (HRP), which together with H<sub>2</sub>O<sub>2</sub>, oxidized Amplex™ Red to produce the pink-colored resorufin. The concentration of resorufin is directly proportional to H<sub>2</sub>O<sub>2</sub> (and DAS) levels. As urine contains metabolites which interfere with these oxidation reactions, we developed a simple two column-based protocol using ion exchange resins to remove these compounds and concentrate the DAS. With this novel cleaning and concentrating method, DAS was concentrated 15 times (confirmed by nuclear magnetic resonance (NMR) spectroscopy) and <1 μM DAS could be detected. Correlation graphs of urine samples spiked with known DAS concentrations versus assay-determined DAS concentrations had high coefficients of determination (R<sup>2</sup>) for 0-10 μM DAS (0.94) and for 0-1 μM DAS (0.91), clearly demonstrating the excellent performance of the two-column protocol with the rDAS Ox reaction mixture. To the best of our knowledge, this is first reported colorimetric enzymatic assay that quantitates DAS in urine.

Analytical BiochemistryVol. 697
University of Alberta (CA)
Good health and well-being
Openalex Percentile: Top 34%
Polyamine Metabolism and Applications
0.47
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.