Description of Streptococcus dentalis sp. nov., Streptococcus gingivalis sp. nov., and Streptococcus lingualis sp. nov., Isolated from Human Oral Cavities

We isolated three novel strains, S1<sup>T</sup>, S2<sup>T</sup>, and S5<sup>T</sup>, from human oral cavities and identified them as distinct novel species. All these strains are facultatively anaerobic, Gram-stain-positive, and non-flagellated bacteria. Their optimal growth conditions for these strains were observed in Columbia broth (CB) at 37 °C, pH 7.0, and in the absence of NaCl. Phylogenetic analyses, employing the 16S rRNA gene and whole-genome sequencing, confirmed that all three strains belong to the genus Streptococcus. The 16S rRNA gene sequences of strains S1<sup>T</sup>, S2<sup>T</sup>, and S5<sup>T</sup> showed the highest similarities to Streptococcus parasanguinis, 98.57%, 99.05%, and 99.05%, respectively, and the orthologous average nucleotide identity (OrthoANI) values between the three strains and S. parasanguinis were 93.82%, 93.67%, and 94.04%, respectively. The pairwise OrthoANI values between the novel strains were 94.37% (S1<sup>T</sup>-S2<sup>T</sup>), 95.03% (S2<sup>T</sup>-S5<sup>T</sup>), and 94.71% (S1<sup>T</sup>-S5<sup>T</sup>). All strains had C<sub>20:1</sub> ω9c and summed feature 8 (C<sub>18:1</sub> ω7c and/or C<sub>18:1</sub> ω6c) as major cellular fatty acids. Additionally, diphosphatidylglycerol (DPG) and hydroxyphosphatidylethanolamine (OH-PE) were identified as major polar lipids. Menaquinone was undetected in all strains. The results from the phylogenetic, phenotypic, chemotaxonomic, and genotypic analyses collectively indicated that strains S1<sup>T</sup>, S2<sup>T</sup>, and S5<sup>T</sup> represent three distinct novel species within the genus Streptococcus, and we propose the names Streptococcus dentalis sp. nov. for strain S1<sup>T</sup> (= KCTC 21234<sup>T</sup> = JCM 36526<sup>T</sup>), Streptococcus gingivalis sp. nov. for strain S2<sup>T</sup> (= KCTC 21235<sup>T</sup> = JCM 36527<sup>T</sup>), and Streptococcus lingualis sp. nov. for strain S5<sup>T</sup> (= KCTC 21236<sup>T</sup> = JCM 36528<sup>T</sup>).

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Publication Details

Journal
The Journal of Microbiology
Published
2024-11-01
DOI
https://doi.org/10.1007/s12275-024-00178-1
Citations
2
Primary Topic
Oral microbiology and periodontitis research
Type
article
Field-Weighted Citation Impact
0.80

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article

Description of Streptococcus dentalis sp. nov., Streptococcus gingivalis sp. nov., and Streptococcus lingualis sp. nov., Isolated from Human Oral Cavities

Jin‐Woo Bae, Jee-Won Choi, Jae‐Yun Lee, Do-Hun Gim et al.
2 citations
The Journal of Microbiology
Oral microbiology and periodontitis research
0.80
article

Description of Streptococcus dentalis sp. nov., Streptococcus gingivalis sp. nov., and Streptococcus lingualis sp. nov., Isolated from Human Oral Cavities

Jin‐Woo Bae, Jee-Won Choi, Jae‐Yun Lee, Do-Hun Gim, Hojun Sung, Su‐Won Jeong, Yun-Hee Choi, Beom-Jin Goo
article en
2 citations

Abstract

We isolated three novel strains, S1<sup>T</sup>, S2<sup>T</sup>, and S5<sup>T</sup>, from human oral cavities and identified them as distinct novel species. All these strains are facultatively anaerobic, Gram-stain-positive, and non-flagellated bacteria. Their optimal growth conditions for these strains were observed in Columbia broth (CB) at 37 °C, pH 7.0, and in the absence of NaCl. Phylogenetic analyses, employing the 16S rRNA gene and whole-genome sequencing, confirmed that all three strains belong to the genus Streptococcus. The 16S rRNA gene sequences of strains S1<sup>T</sup>, S2<sup>T</sup>, and S5<sup>T</sup> showed the highest similarities to Streptococcus parasanguinis, 98.57%, 99.05%, and 99.05%, respectively, and the orthologous average nucleotide identity (OrthoANI) values between the three strains and S. parasanguinis were 93.82%, 93.67%, and 94.04%, respectively. The pairwise OrthoANI values between the novel strains were 94.37% (S1<sup>T</sup>-S2<sup>T</sup>), 95.03% (S2<sup>T</sup>-S5<sup>T</sup>), and 94.71% (S1<sup>T</sup>-S5<sup>T</sup>). All strains had C<sub>20:1</sub> ω9c and summed feature 8 (C<sub>18:1</sub> ω7c and/or C<sub>18:1</sub> ω6c) as major cellular fatty acids. Additionally, diphosphatidylglycerol (DPG) and hydroxyphosphatidylethanolamine (OH-PE) were identified as major polar lipids. Menaquinone was undetected in all strains. The results from the phylogenetic, phenotypic, chemotaxonomic, and genotypic analyses collectively indicated that strains S1<sup>T</sup>, S2<sup>T</sup>, and S5<sup>T</sup> represent three distinct novel species within the genus Streptococcus, and we propose the names Streptococcus dentalis sp. nov. for strain S1<sup>T</sup> (= KCTC 21234<sup>T</sup> = JCM 36526<sup>T</sup>), Streptococcus gingivalis sp. nov. for strain S2<sup>T</sup> (= KCTC 21235<sup>T</sup> = JCM 36527<sup>T</sup>), and Streptococcus lingualis sp. nov. for strain S5<sup>T</sup> (= KCTC 21236<sup>T</sup> = JCM 36528<sup>T</sup>).

The Journal of MicrobiologyVol. 62(11)
Kyung Hee Cyber University (KR), Kyung Hee University (KR)
Ministry of Food and Drug Safety, National Research Foundation of Korea
Openalex Percentile: Top 26%
Oral microbiology and periodontitis research
0.80
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