AI-enabled pipeline for virus detection, validation, and SNP discovery from next-generation sequencing data
The robustness of the pipeline is confirmed by the recovery of complete viral sequences, which improves our understanding of viral genomics. This research aims to develop an auto-bioinformatics pipeline for novel viral sequence discovery, <i>in vitro</i> validation, and SNPs using the Python (AI) language to understand viral evolution. This study highlights the synergy between traditional bioinformatics techniques and modern approaches, providing a robust tool for analyzing viral genomes and contributing to the broader field of viral genomics.
Authors
- Abozar Ghorbani (ORCID: https://orcid.org/0000-0002-2183-0033)
- Pietro Hiram Guzzi (ORCID: https://orcid.org/0000-0001-5542-2997)
- Mahsa Rostami (ORCID: https://orcid.org/0000-0002-6684-0366)
Institutions
- Atomic Energy Organization of Iran (IR)
- Magna Graecia University (IT)
- Nuclear Science and Technology Research Institute
Publication Details
- Journal
- Frontiers in Genetics
- Published
- 2024-11-11
- DOI
- https://doi.org/10.3389/fgene.2024.1492752
- Citations
- 8
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 1.87