AI-enabled pipeline for virus detection, validation, and SNP discovery from next-generation sequencing data

The robustness of the pipeline is confirmed by the recovery of complete viral sequences, which improves our understanding of viral genomics. This research aims to develop an auto-bioinformatics pipeline for novel viral sequence discovery, <i>in vitro</i> validation, and SNPs using the Python (AI) language to understand viral evolution. This study highlights the synergy between traditional bioinformatics techniques and modern approaches, providing a robust tool for analyzing viral genomes and contributing to the broader field of viral genomics.

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Publication Details

Journal
Frontiers in Genetics
Published
2024-11-11
DOI
https://doi.org/10.3389/fgene.2024.1492752
Citations
8
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
1.87
Controls
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article

AI-enabled pipeline for virus detection, validation, and SNP discovery from next-generation sequencing data

Abozar Ghorbani, Pietro Hiram Guzzi, Mahsa Rostami
8 citations
Frontiers in Genetics
Genomics and Phylogenetic Studies
1.87
article

AI-enabled pipeline for virus detection, validation, and SNP discovery from next-generation sequencing data

Abozar Ghorbani, Pietro Hiram Guzzi, Mahsa Rostami
article en
8 citations

Abstract

The robustness of the pipeline is confirmed by the recovery of complete viral sequences, which improves our understanding of viral genomics. This research aims to develop an auto-bioinformatics pipeline for novel viral sequence discovery, <i>in vitro</i> validation, and SNPs using the Python (AI) language to understand viral evolution. This study highlights the synergy between traditional bioinformatics techniques and modern approaches, providing a robust tool for analyzing viral genomes and contributing to the broader field of viral genomics.

Frontiers in GeneticsVol. 15
Atomic Energy Organization of Iran (IR), Magna Graecia University (IT), Nuclear Science and Technology Research Institute
Openalex Percentile: Top 14%
Genomics and Phylogenetic Studies
1.87
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