Inhibition of Kornblum Reaction with Lithium Salts in S<sub>N</sub>2 Reactions of Sulfonates and a Nucleophile Containing a Pyridine <i>N</i>-Oxide Moiety: Convergent and Selective Synthesis of an MRGPRX2 Antagonist

A critical step in the development of a convergent synthesis of an MRGPRX2 antagonist (<b>1</b>) was the S<sub>N</sub>2 reaction with a highly functionalized lactamide electrophile and a unique difluoropiperidine nucleophile containing a pyridine <i>N</i>-oxide moiety. Initial reactions with sulfonate leaving groups exhibited superb stereoselectivity, but yields were very low due to side reactions originated from competitive Kornblum reactions of the pyridine <i>N</i>-oxide and the sulfonates. Markedly improved reaction profiles were achieved by including stoichiometric lithium triflate. NMR data provided insights into how the lithium cation impacted the pyridine <i>N</i>-oxide through coordination and attenuating its nucleophilicity, leading to the inhibition of the undesired Kornblum reactions. Our approach is highly relevant to preservation of the <i>N</i>-oxide, a structural motif known to several marketed products and emerging as an important class in drug discovery in nucleophilic substitutions. Application of this method enabled the production of the target (<b>1</b> and its HCl salt <b>1a</b>) up to multikilogram scale with high selectivity and in much improved yield.

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Publication Details

Journal
The Journal of Organic Chemistry
Published
2024-11-11
DOI
https://doi.org/10.1021/acs.joc.4c02056
Citations
4
Primary Topic
Organic and Inorganic Chemical Reactions
Type
article
Field-Weighted Citation Impact
0.96
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article

Inhibition of Kornblum Reaction with Lithium Salts in SN2 Reactions of Sulfonates and a Nucleophile Containing a Pyridine N-Oxide Moiety: Convergent and Selective Synthesis of an MRGPRX2 Antagonist

Sing R. Gurung, Mark G. Nilson, Kevin Splaine, Bill C. Hawkins et al.
4 citations
The Journal of Organic Chemistry
Organic and Inorganic Chemical Reactions
0.96
article

Inhibition of Kornblum Reaction with Lithium Salts in SN2 Reactions of Sulfonates and a Nucleophile Containing a Pyridine N-Oxide Moiety: Convergent and Selective Synthesis of an MRGPRX2 Antagonist

Sing R. Gurung, Mark G. Nilson, Kevin Splaine, Bill C. Hawkins, Yexenia Nieves‐Quinones, Kehua Yin, Shiping Xie, Jakka Kavitha, Damian P. Hruszkewycz, Heng Chen, Holly A. Slepian
article en
4 citations

Abstract

A critical step in the development of a convergent synthesis of an MRGPRX2 antagonist (<b>1</b>) was the S<sub>N</sub>2 reaction with a highly functionalized lactamide electrophile and a unique difluoropiperidine nucleophile containing a pyridine <i>N</i>-oxide moiety. Initial reactions with sulfonate leaving groups exhibited superb stereoselectivity, but yields were very low due to side reactions originated from competitive Kornblum reactions of the pyridine <i>N</i>-oxide and the sulfonates. Markedly improved reaction profiles were achieved by including stoichiometric lithium triflate. NMR data provided insights into how the lithium cation impacted the pyridine <i>N</i>-oxide through coordination and attenuating its nucleophilicity, leading to the inhibition of the undesired Kornblum reactions. Our approach is highly relevant to preservation of the <i>N</i>-oxide, a structural motif known to several marketed products and emerging as an important class in drug discovery in nucleophilic substitutions. Application of this method enabled the production of the target (<b>1</b> and its HCl salt <b>1a</b>) up to multikilogram scale with high selectivity and in much improved yield.

The Journal of Organic ChemistryVol. 89(23)
South College (US), GlaxoSmithKline (United States) (US)
Clean water and sanitation
Openalex Percentile: Top 27%
Organic and Inorganic Chemical Reactions
0.96
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