Advancing hyperspectral imaging techniques for root systems: a new pipeline for macro- and microscale image acquisition and classification
Our study addressed the key challenges in HSI acquisition and data processing for root system analysis and lays the groundwork for further exploration of VNIR HSI application across various scales of root system studies. This work provides a full data analysis pipeline that can be utilized as an online Python-based tool for the semi-automated analysis of root-soil HSI data.
Authors
- Corine Faehn (ORCID: https://orcid.org/0000-0003-4558-3847)
- Katja Karppinen (ORCID: https://orcid.org/0000-0002-5129-0656)
- Kirsten Krause (ORCID: https://orcid.org/0000-0001-9739-2466)
- Markku Keinänen (ORCID: https://orcid.org/0000-0003-0458-5520)
- Grzegorz Konert
Institutions
- University of Turku (FI)
- UiT The Arctic University of Norway (NO)
Publication Details
- Journal
- Plant Methods
- Published
- 2024-11-11
- DOI
- https://doi.org/10.1186/s13007-024-01297-x
- Citations
- 4
- Primary Topic
- Spectroscopy and Chemometric Analyses
- Type
- article
- Field-Weighted Citation Impact
- 0.94
Funders
- Universitetet i Tromsø