Exploration of an intrinsically explainable self-attention based model for prototype generation on single-channel EEG sleep stage classification

Prototype-based methods in deep learning offer interpretable explanations for decisions by comparing inputs to typical representatives in the data. This study explores the adaptation of SESM, a self-attention-based prototype method successful in electrocardiogram (ECG) tasks, for electroencephalogram (EEG) signals. The architecture is evaluated on sleep stage classification, exploring its efficacy in predicting stages with single-channel EEG. The model achieves comparable test accuracy compared to EEGNet, a state-of-the-art black-box architecture for EEG classification. The generated prototypical components are exaimed qualitatively and using the area over the perterbation curve (AOPC) indicate some alignment with expected bio-markers for different sleep stages such as alpha spindles and slow waves in non-REM sleep, but the results are severely limited by the model's ability to only extract and present information in the time-domain. Ablation studies are used to explore the impact of kernel size, number of heads, and diversity threshold on model performance and explainability. This study represents the first application of a self-attention based prototype method to EEG data and provides a step forward in explainable AI for EEG data analysis.

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Publication Details

Journal
Scientific Reports
Published
2024-11-11
DOI
https://doi.org/10.1038/s41598-024-79139-y
Citations
4
Primary Topic
EEG and Brain-Computer Interfaces
Type
article
Field-Weighted Citation Impact
1.37
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article

Exploration of an intrinsically explainable self-attention based model for prototype generation on single-channel EEG sleep stage classification

Chandan Karmakar, Ahsan Habib, Brenton Adey
4 citations
Scientific Reports
EEG and Brain-Computer Interfaces
1.37
article

Exploration of an intrinsically explainable self-attention based model for prototype generation on single-channel EEG sleep stage classification

Chandan Karmakar, Ahsan Habib, Brenton Adey
article en
4 citations

Abstract

Prototype-based methods in deep learning offer interpretable explanations for decisions by comparing inputs to typical representatives in the data. This study explores the adaptation of SESM, a self-attention-based prototype method successful in electrocardiogram (ECG) tasks, for electroencephalogram (EEG) signals. The architecture is evaluated on sleep stage classification, exploring its efficacy in predicting stages with single-channel EEG. The model achieves comparable test accuracy compared to EEGNet, a state-of-the-art black-box architecture for EEG classification. The generated prototypical components are exaimed qualitatively and using the area over the perterbation curve (AOPC) indicate some alignment with expected bio-markers for different sleep stages such as alpha spindles and slow waves in non-REM sleep, but the results are severely limited by the model's ability to only extract and present information in the time-domain. Ablation studies are used to explore the impact of kernel size, number of heads, and diversity threshold on model performance and explainability. This study represents the first application of a self-attention based prototype method to EEG data and provides a step forward in explainable AI for EEG data analysis.

Scientific ReportsVol. 14(1)
Deakin University (AU)
Openalex Percentile: Top 19%
EEG and Brain-Computer Interfaces
1.37
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