Crafting Molecular Tools for 15‐Lipoxygenase‐1 in a Single Step

Abstract Small molecule modulators are powerful tools for selectively probing and manipulating proteins in native biological systems. However, the development of versatile modulators that exhibit desired properties is hindered by the lack of a rapid and robust synthetic strategy. Here, we develop a facile and reliable one‐step methodology for the generation of multifunctional toolboxes encompassing a wide variety of chemical modulators with different desired features. These modulators bind irreversibly to the protein target via a selective warhead. Key elements are introduced onto the warhead in a single step using multi‐component reactions. To illustrate the power of this new technology, we synthesized a library of diverse modulators designed to explore a highly challenging and poorly understood protein, human 15‐lipoxygenase‐1. Modulators made include; activity‐based/photoaffinity probes, chemosensors, photocrosslinkers, as well as light‐controlled and high‐affinity inhibitors. The efficacy of our compounds was successfully established through the provision of on demand inhibition and labeling of our target protein in vitro , in cellulo and in vivo ; thus, proving that this technology has promising potential for applications in many complex biological systems.

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Publication Details

Journal
Angewandte Chemie
Published
2024-11-11
DOI
https://doi.org/10.1002/ange.202418291
Primary Topic
Synthesis and Biological Evaluation
Type
article
Field-Weighted Citation Impact
0.00

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article

Crafting Molecular Tools for 15‐Lipoxygenase‐1 in a Single Step

Christos Papadopoulos, Constantinos G. Neochoritis, Konstantinos S. Adamis, Anastasia Louka et al.
Angewandte Chemie
Synthesis and Biological Evaluation
article

Crafting Molecular Tools for 15‐Lipoxygenase‐1 in a Single Step

Christos Papadopoulos, Constantinos G. Neochoritis, Konstantinos S. Adamis, Anastasia Louka, Dimitris Korovesis, Nektarios Tavernarakis, Nikolaos Eleftheriadis, Ntaniela Spacho, Eirini-Eleni Kalaitzaki
article en

Abstract

Abstract Small molecule modulators are powerful tools for selectively probing and manipulating proteins in native biological systems. However, the development of versatile modulators that exhibit desired properties is hindered by the lack of a rapid and robust synthetic strategy. Here, we develop a facile and reliable one‐step methodology for the generation of multifunctional toolboxes encompassing a wide variety of chemical modulators with different desired features. These modulators bind irreversibly to the protein target via a selective warhead. Key elements are introduced onto the warhead in a single step using multi‐component reactions. To illustrate the power of this new technology, we synthesized a library of diverse modulators designed to explore a highly challenging and poorly understood protein, human 15‐lipoxygenase‐1. Modulators made include; activity‐based/photoaffinity probes, chemosensors, photocrosslinkers, as well as light‐controlled and high‐affinity inhibitors. The efficacy of our compounds was successfully established through the provision of on demand inhibition and labeling of our target protein in vitro , in cellulo and in vivo ; thus, proving that this technology has promising potential for applications in many complex biological systems.

Angewandte ChemieVol. 137(6)
University of Crete (GR), FORTH Institute of Molecular Biology and Biotechnology (GR), Institute of Molecular Biology and Biotechnology (BG), Foundation for Research and Technology Hellas (GR)
Empeirikio Foundation, General Secretariat for Research and Technology, Hellenic Foundation for Research and Innovation, H2020 Marie Skłodowska-Curie Actions, HORIZON EUROPE European Research Council
Openalex Percentile: Top 85%
Synthesis and Biological Evaluation
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