Challenging a decades-old paradigm: ProB and ProA do not channel the unstable intermediate in proline synthesis after all
The pathway for synthesis of proline in most forms of life produces a highly unstable intermediate, γ-L-glutamyl 5-phosphate (GP). For nearly 70 y, channeling of this intermediate from the active site of glutamate 5-kinase to the active site of GP reductase has been believed to protect GP from cyclization to a dead-end product. However, the evidence presented in support of this idea is not conclusive. We show that changes in the structures of the kinase or reductase that should preclude a protein-protein interaction do not compromise proline synthesis in <i>Escherichia coli</i>, demonstrating that channeling does not occur. We calculate that the half-life of GP is 320 ms. Although GP is indeed unstable, it should diffuse the length of an <i>E. coli</i> cell in less than 3 ms. Thus, most GP produced by glutamate 5-kinase should encounter the active site of GP reductase before cyclization occurs.
Authors
- Andrew B. Morgenthaler (ORCID: https://orcid.org/0000-0003-3822-0212)
- Shelley D. Copley (ORCID: https://orcid.org/0000-0001-9727-7919)
- Matilda Newton (ORCID: https://orcid.org/0000-0003-2213-3587)
- Ashley L. Azadeh
Institutions
- Cooperative Institute for Research in Environmental Sciences (US)
- University of Colorado Boulder (US)
- Royal Society Te Apārangi (NZ)
- Amyris (United States) (US)
Publication Details
- Journal
- Proceedings of the National Academy of Sciences
- Published
- 2024-11-08
- DOI
- https://doi.org/10.1073/pnas.2413673121
- Primary Topic
- Enzyme Structure and Function
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- National Aeronautics and Space Administration
- Cooperative Institute for Research in Environmental Sciences
- National Institute of General Medical Sciences