Microbispora maris sp. nov., a novel actinobacterium isolated from the gill of the leopard coral grouper (Plectropomus leopardus)

A novel actinomycete, designated strain ZYX-F-249<sup>T</sup>, was isolated from the gill of a leopard coral grouper in Yongxing Island, Hainan Province, China. Based on 16S rRNA gene sequence analysis, strain ZYX-F-249<sup>T</sup> belonged to the genus <i>Microbispora</i>, with high similarities to <i>Microbispora rosea</i> ATCC 12950<sup>T</sup> (98.7 %), <i>Microbispora hainanensis</i> 211020<sup>T</sup> (98.5 %), <i>Microbispora clausenae</i> CLES2<sup>T</sup> (98.4 %), <i>Microbispora bryophytorum</i> NEAU-TX2-2<sup>T</sup> (98.1 %) and <i>Microbispora oryzae</i>RL4-1S<sup>T</sup> (98.0 %). Phylogenetic analysis of the 16S rRNA gene sequence of strain ZYX-F-249<sup>T</sup> showed that the strain formed a stable subclade with <i>Microbispora rosea</i> ATCC 12950<sup>T</sup> in the genus <i>Microbispora</i>. The cell wall of the novel isolate contained <i>meso</i>-diaminopimelic acid, while whole-cell sugars were madurose, glucose and ribose. The predominant menaquinones were MK-9(H<sub>6</sub>), MK-9(H<sub>4</sub>), MK-9(H<sub>2</sub>) and MK-9(H<sub>0</sub>). The characteristic phospholipids (PLs) were phosphatidylethanolamine, phosphatidylinositol, diphosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylinositol mannoside, glycophospholipids and an unknown PL. The major cellular fatty acids (>10%) were <i>iso</i>-C<sub>16 : 0</sub> and <i>iso</i>-C<sub>18 : 0</sub>. Genome sequencing showed a DNA G+C content of 71.6%. The low average nucleotide identity, digital DNA-DNA hybridization and average amino acid identity values demonstrated that strain ZYX-F-249<sup>T</sup> could be readily distinguished from closely related species. Based on data from these phylogenetic, chemotaxonomic and physiological characteristics, strain ZYX-F-249<sup>T</sup> represents a novel species of the genus <i>Microbispora</i>, for which the name <i>Microbispora maris</i> sp. nov. is proposed. The type strain is ZYX-F-249<sup>T</sup> (=CCTCC AA 2023030<sup>T</sup> =JCM 36778<sup>T</sup>).

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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Published
2024-11-08
DOI
https://doi.org/10.1099/ijsem.0.006568
Primary Topic
Genomics and Phylogenetic Studies
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article

Microbispora maris sp. nov., a novel actinobacterium isolated from the gill of the leopard coral grouper (Plectropomus leopardus)

You‐Xing Zhao, Qing‐Yun Ma, Huan Xie, Hao‐Fu Dai et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Genomics and Phylogenetic Studies
article

Microbispora maris sp. nov., a novel actinobacterium isolated from the gill of the leopard coral grouper (Plectropomus leopardus)

You‐Xing Zhao, Qing‐Yun Ma, Huan Xie, Hao‐Fu Dai, Yu-E Hao, Li Yang, Qingyi Xie
article en

Abstract

A novel actinomycete, designated strain ZYX-F-249<sup>T</sup>, was isolated from the gill of a leopard coral grouper in Yongxing Island, Hainan Province, China. Based on 16S rRNA gene sequence analysis, strain ZYX-F-249<sup>T</sup> belonged to the genus <i>Microbispora</i>, with high similarities to <i>Microbispora rosea</i> ATCC 12950<sup>T</sup> (98.7 %), <i>Microbispora hainanensis</i> 211020<sup>T</sup> (98.5 %), <i>Microbispora clausenae</i> CLES2<sup>T</sup> (98.4 %), <i>Microbispora bryophytorum</i> NEAU-TX2-2<sup>T</sup> (98.1 %) and <i>Microbispora oryzae</i>RL4-1S<sup>T</sup> (98.0 %). Phylogenetic analysis of the 16S rRNA gene sequence of strain ZYX-F-249<sup>T</sup> showed that the strain formed a stable subclade with <i>Microbispora rosea</i> ATCC 12950<sup>T</sup> in the genus <i>Microbispora</i>. The cell wall of the novel isolate contained <i>meso</i>-diaminopimelic acid, while whole-cell sugars were madurose, glucose and ribose. The predominant menaquinones were MK-9(H<sub>6</sub>), MK-9(H<sub>4</sub>), MK-9(H<sub>2</sub>) and MK-9(H<sub>0</sub>). The characteristic phospholipids (PLs) were phosphatidylethanolamine, phosphatidylinositol, diphosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylinositol mannoside, glycophospholipids and an unknown PL. The major cellular fatty acids (>10%) were <i>iso</i>-C<sub>16 : 0</sub> and <i>iso</i>-C<sub>18 : 0</sub>. Genome sequencing showed a DNA G+C content of 71.6%. The low average nucleotide identity, digital DNA-DNA hybridization and average amino acid identity values demonstrated that strain ZYX-F-249<sup>T</sup> could be readily distinguished from closely related species. Based on data from these phylogenetic, chemotaxonomic and physiological characteristics, strain ZYX-F-249<sup>T</sup> represents a novel species of the genus <i>Microbispora</i>, for which the name <i>Microbispora maris</i> sp. nov. is proposed. The type strain is ZYX-F-249<sup>T</sup> (=CCTCC AA 2023030<sup>T</sup> =JCM 36778<sup>T</sup>).

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGYVol. 74(11)
Chinese Academy of Tropical Agricultural Sciences (CN), University of South China (CN)
Natural Science Foundation of Hainan Province
Life below water
Openalex Percentile: Top 82%
Genomics and Phylogenetic Studies
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