Synergistic biophysics and machine learning modeling to rapidly predict cardiac growth probability

Computational models that can predict growth and remodeling of the heart could have important clinical applications. However, the time it takes to calibrate and run current models while considering data uncertainty and variability makes them impractical for routine clinical use. This study aims to address this need by creating a computational framework to efficiently predict cardiac growth probability. We utilized a biophysics model to rapidly simulate cardiac growth following mitral valve regurgitation (MVR). Here we developed a two-tiered Bayesian History Matching approach augmented with Gaussian process emulators for efficient calibration of model parameters to align with growth outcomes within a 95% confidence interval. We first generated a synthetic data set to assess the accuracy of our framework, and the effect of changes in data uncertainty on growth predictions. We then calibrated our model to match baseline and chronic canine MVR data and used an independent data set to successfully validate the ability of our calibrated model to accurately predict cardiac growth probability. The combined biophysics and machine learning modeling framework we proposed in this study can be easily translated to predict patient-specific cardiac growth.

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Institutions

Publication Details

Journal
Computers in Biology and Medicine
Published
2024-11-07
DOI
https://doi.org/10.1016/j.compbiomed.2024.109323
Citations
4
Primary Topic
Cardiovascular Function and Risk Factors
Type
article
Field-Weighted Citation Impact
1.61

Funders

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article

Synergistic biophysics and machine learning modeling to rapidly predict cardiac growth probability

Clara E. Jones, Pim J. A. Oomen
4 citations
Computers in Biology and Medicine
Cardiovascular Function and Risk Factors
1.61
article

Synergistic biophysics and machine learning modeling to rapidly predict cardiac growth probability

Clara E. Jones, Pim J. A. Oomen
article en
4 citations

Abstract

Computational models that can predict growth and remodeling of the heart could have important clinical applications. However, the time it takes to calibrate and run current models while considering data uncertainty and variability makes them impractical for routine clinical use. This study aims to address this need by creating a computational framework to efficiently predict cardiac growth probability. We utilized a biophysics model to rapidly simulate cardiac growth following mitral valve regurgitation (MVR). Here we developed a two-tiered Bayesian History Matching approach augmented with Gaussian process emulators for efficient calibration of model parameters to align with growth outcomes within a 95% confidence interval. We first generated a synthetic data set to assess the accuracy of our framework, and the effect of changes in data uncertainty on growth predictions. We then calibrated our model to match baseline and chronic canine MVR data and used an independent data set to successfully validate the ability of our calibrated model to accurately predict cardiac growth probability. The combined biophysics and machine learning modeling framework we proposed in this study can be easily translated to predict patient-specific cardiac growth.

Computers in Biology and MedicineVol. 184
Edwards Lifesciences (United States) (US)
National Institutes of Health, National Heart, Lung, and Blood Institute
Openalex Percentile: Top 14%
Cardiovascular Function and Risk Factors
1.61
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Synergistic biophysics and machine learning modeling to rapidly predict cardiac growth probability — Clara E. Jones, Pim J. A. Oomen · Computers in Biology and Medicine (2024) | TGRS Research Map | TGRS