Robust estimation of the incubation period and the time of exposure using <i>γ</i> -divergence

Estimating the exposure time to single infectious pathogens and the associated incubation period, based on symptom onset data, is crucial for identifying infection sources and implementing public health interventions. However, data from rapid surveillance systems designed for early outbreak warning often come with outliers originated from individuals who were not directly exposed to the initial source of infection (i.e. tertiary and subsequent infection cases), making the estimation of exposure time challenging. To address this issue, this study uses a three-parameter lognormal distribution and proposes a new <i>γ</i>-divergence-based robust approach for estimating the parameter corresponding to exposure time with a tailored optimization procedure using the majorization-minimization algorithm, which ensures the monotonic decreasing property of the objective function. Comprehensive numerical experiments and real data analyses suggest that our method is superior to conventional methods in terms of bias, mean squared error, and coverage probability of 95% confidence intervals.

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Publication Details

Journal
Journal of Applied Statistics
Published
2024-11-06
DOI
https://doi.org/10.1080/02664763.2024.2420221
Citations
2
Primary Topic
COVID-19 epidemiological studies
Type
article
Field-Weighted Citation Impact
0.79

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article

Robust estimation of the incubation period and the time of exposure using γ -divergence

Takayuki Kawashima, Daisuke Yoneoka, Akifumi Eguchi, Yuta Tanoue et al.
2 citations
Journal of Applied Statistics
COVID-19 epidemiological studies
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article

Robust estimation of the incubation period and the time of exposure using γ -divergence

Takayuki Kawashima, Daisuke Yoneoka, Akifumi Eguchi, Yuta Tanoue, Shuhei Nomura
article en
2 citations

Abstract

Estimating the exposure time to single infectious pathogens and the associated incubation period, based on symptom onset data, is crucial for identifying infection sources and implementing public health interventions. However, data from rapid surveillance systems designed for early outbreak warning often come with outliers originated from individuals who were not directly exposed to the initial source of infection (i.e. tertiary and subsequent infection cases), making the estimation of exposure time challenging. To address this issue, this study uses a three-parameter lognormal distribution and proposes a new <i>γ</i>-divergence-based robust approach for estimating the parameter corresponding to exposure time with a tailored optimization procedure using the majorization-minimization algorithm, which ensures the monotonic decreasing property of the objective function. Comprehensive numerical experiments and real data analyses suggest that our method is superior to conventional methods in terms of bias, mean squared error, and coverage probability of 95% confidence intervals.

Journal of Applied StatisticsVol. 52(6)
Tokyo Institute of Technology (JP), Chiba University (JP), Keio University (JP), National Institute of Infectious Diseases (JP), Tokyo University of Marine Science and Technology (JP)
Japan Science and Technology Corporation, Japan Society for the Promotion of Science, Precursory Research for Embryonic Science and Technology
Zero hunger
Openalex Percentile: Top 29%
COVID-19 epidemiological studies
0.79
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