Proteomic predictors of mortality in stable COPD

COPD is the 3<sup>rd</sup> leading cause of death worldwide. Clinical mortality predictors have been extensively described, including age, symptoms, comorbidities, lung function, and some biomarkers. However, proteomics can provide a more comprehensive blood profile linked to its pathophysiological mechanisms. <bold>We aimed</bold> to identify proteomic predictors of long-term mortality in stable patients. <bold>Methods:</bold> Blind LC-MS/MS and hypothesis-driven multiplex immunoassay approaches were used to analyse plasma samples from 5-year-followed 34 COPD patients (69±9 years old, 29% ♀, FEV<sub>1</sub> 41±15% ref., DL<sub>co</sub> 47±18% ref.). Reactome and UniProt were used for protein categorisation and Flame for AI modelling. <bold>Results:</bold> 32% of patients died before the 4<sup>th</sup> year, mostly by cardiovascular (45%) or respiratory (45%) events. 402 proteins/peptides were identified: 209 were valid for quantitative comparisons (data present in ≥80% of individuals in both groups), and the remaining were qualitatively analysed. 35 proteins showed differences between survivors and non-survivors, mainly related to the immune response (12), haemostasis (10), and complement cascade (4). However, for the predictor model (5-fold CV: 94% accuracy, 89% MCC, 85% coverage), 10 proteins were selected. Those were linked to hemostasis (4), complement cascade (2), innate immunity (1), and muscle structures (2). <bold>Conclusion:</bold> A blood proteomic signature, composed of elements mainly linked to coagulation and complement cascades, may be a valuable predictor of long-term mortality in stable COPD patients. <bold>Funding</bold>: SAF2014-54371 (Spain-EU); CIBERES, PI21/00785, BA22/00009, FI22/000003 & MV23/00012 (ISCiii-EU); SEPAR 2015, 2016, 2019 & 2021; FUCAP 2014, SOCAP 2020, Menarini Grant 2015; 2021 SGR 00100 (Catalan Gov.)

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Published
2024-09-14
DOI
https://doi.org/10.1183/13993003.congress-2024.oa4646
Primary Topic
Chronic Obstructive Pulmonary Disease (COPD) Research
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article
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article

Proteomic predictors of mortality in stable COPD

Diego Agustin Rodriguez, Luis Seijó, Carme Casadevall, Sergi Pascual-Guàrdia et al.
Chronic Obstructive Pulmonary Disease (COPD) Research
article

Proteomic predictors of mortality in stable COPD

Diego Agustin Rodriguez, Luis Seijó, Carme Casadevall, Sergi Pascual-Guàrdia, Esther Barreiro, José Luís López-Campos, Cesar Jessé Enríquez-Rodríguez, Oswaldo Antonio Caguana-Vélez, Eduard Monsó, Alvar G.N. Agustí, Joaquim Gea, Rosa Faner, Borja G. Cosío, Gregorio Peces-Barba, Ady Castro-Acosta, On Behalf Biomepoc Group
article en

Abstract

COPD is the 3<sup>rd</sup> leading cause of death worldwide. Clinical mortality predictors have been extensively described, including age, symptoms, comorbidities, lung function, and some biomarkers. However, proteomics can provide a more comprehensive blood profile linked to its pathophysiological mechanisms. <bold>We aimed</bold> to identify proteomic predictors of long-term mortality in stable patients. <bold>Methods:</bold> Blind LC-MS/MS and hypothesis-driven multiplex immunoassay approaches were used to analyse plasma samples from 5-year-followed 34 COPD patients (69±9 years old, 29% ♀, FEV<sub>1</sub> 41±15% ref., DL<sub>co</sub> 47±18% ref.). Reactome and UniProt were used for protein categorisation and Flame for AI modelling. <bold>Results:</bold> 32% of patients died before the 4<sup>th</sup> year, mostly by cardiovascular (45%) or respiratory (45%) events. 402 proteins/peptides were identified: 209 were valid for quantitative comparisons (data present in ≥80% of individuals in both groups), and the remaining were qualitatively analysed. 35 proteins showed differences between survivors and non-survivors, mainly related to the immune response (12), haemostasis (10), and complement cascade (4). However, for the predictor model (5-fold CV: 94% accuracy, 89% MCC, 85% coverage), 10 proteins were selected. Those were linked to hemostasis (4), complement cascade (2), innate immunity (1), and muscle structures (2). <bold>Conclusion:</bold> A blood proteomic signature, composed of elements mainly linked to coagulation and complement cascades, may be a valuable predictor of long-term mortality in stable COPD patients. <bold>Funding</bold>: SAF2014-54371 (Spain-EU); CIBERES, PI21/00785, BA22/00009, FI22/000003 & MV23/00012 (ISCiii-EU); SEPAR 2015, 2016, 2019 & 2021; FUCAP 2014, SOCAP 2020, Menarini Grant 2015; 2021 SGR 00100 (Catalan Gov.)

Universitat Autònoma de Barcelona (ES), Research Institute Hospital 12 de Octubre (ES), Corporació Sanitària Parc Taulí (ES), Hospital de Sabadell (ES), Health Research Institute of the Balearic Islands (ES), Hospital Universitario Fundación Jiménez Díaz (ES), Hospital Del Mar (ES), Clinica Universidad de Navarra (ES), GlaxoSmithKline (Spain) (ES), Hospital Universitario Son Espases (ES), Hospital Universitario Virgen del Rocío (ES), Fundació Clínic per a la Recerca Biomèdica (ES), Universidad Autónoma de Madrid (ES)
Good health and well-being
Openalex Percentile: Top 63%
Chronic Obstructive Pulmonary Disease (COPD) Research
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