Discovery of CRBN-Dependent WEE1 Molecular Glue Degraders from a Multicomponent Combinatorial Library

Small molecules promoting protein-protein interactions produce a range of therapeutic outcomes. Molecular glue degraders exemplify this concept due to their compact drug-like structures and ability to engage targets without reliance on existing cognate ligands. While cereblon molecular glue degraders containing glutarimide scaffolds have been approved for treatment of multiple myeloma and acute myeloid leukemia, the design of new therapeutically relevant monovalent degraders remains challenging. We report here an approach to glutarimide-containing molecular glue synthesis using multicomponent reactions as a central modular core-forming step. Screening the resulting library identified HRZ-1 derivatives that target casein kinase 1 α (CK1α) and Wee-like protein kinase (WEE1). Further medicinal chemistry efforts led to identification of selective monovalent WEE1 degraders that provide a potential starting point for the eventual development of a selective chemical degrader probe. The structure of the hit WEE1 degrader complex with CRBN-DDB1 and WEE1 provides a model of the protein-protein interface and ideas to rationalize the observed kinase selectivity. Our findings suggest that modular synthetic routes combined with in-depth structural characterization give access to selective molecular glue degraders and expansion of the CRBN-degradable proteome.

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Publication Details

Journal
Journal of the American Chemical Society
Published
2024-11-05
DOI
https://doi.org/10.1021/jacs.4c06127
Citations
33
Primary Topic
Protein Degradation and Inhibitors
Type
article
Field-Weighted Citation Impact
7.72

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article

Discovery of CRBN-Dependent WEE1 Molecular Glue Degraders from a Multicomponent Combinatorial Library

Zixuan Jiang, Eric S. Fischer, Kheewoong Baek, Katherine A. Donovan et al.
33 citations
Journal of the American Chemical Society
Protein Degradation and Inhibitors
7.72
article

Discovery of CRBN-Dependent WEE1 Molecular Glue Degraders from a Multicomponent Combinatorial Library

Zixuan Jiang, Eric S. Fischer, Kheewoong Baek, Katherine A. Donovan, Michelle T. Tang, Stephen M. Hinshaw, Nathanael S. Gray, Hlib Razumkov, Nada Mageed, Zhengnian Li, Rebecca J. Metivier, Woong Sub Byun, Roman C. Sarott, Qixiang Geng, Inchul You, Pooreum Seo
article en
33 citations

Abstract

Small molecules promoting protein-protein interactions produce a range of therapeutic outcomes. Molecular glue degraders exemplify this concept due to their compact drug-like structures and ability to engage targets without reliance on existing cognate ligands. While cereblon molecular glue degraders containing glutarimide scaffolds have been approved for treatment of multiple myeloma and acute myeloid leukemia, the design of new therapeutically relevant monovalent degraders remains challenging. We report here an approach to glutarimide-containing molecular glue synthesis using multicomponent reactions as a central modular core-forming step. Screening the resulting library identified HRZ-1 derivatives that target casein kinase 1 α (CK1α) and Wee-like protein kinase (WEE1). Further medicinal chemistry efforts led to identification of selective monovalent WEE1 degraders that provide a potential starting point for the eventual development of a selective chemical degrader probe. The structure of the hit WEE1 degrader complex with CRBN-DDB1 and WEE1 provides a model of the protein-protein interface and ideas to rationalize the observed kinase selectivity. Our findings suggest that modular synthetic routes combined with in-depth structural characterization give access to selective molecular glue degraders and expansion of the CRBN-degradable proteome.

Journal of the American Chemical SocietyVol. 146(46)
Harvard University (US), Dana-Farber Cancer Institute (US), Stanford University (US)
National Science Foundation, Damon Runyon Cancer Research Foundation, Sanofi, Springworks Therapeutics, Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung, Astellas Pharma, National Institutes of Health, National Cancer Institute, Stanford Cancer Institute
Zero hunger
Openalex Percentile: Top 2%
Protein Degradation and Inhibitors
7.72
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