Complete genome of single locus sequence typing D1 strain Cutibacterium acnes CN6 isolated from healthy facial skin
The whole genome sequencing of C. acnes CN6 was conducted using MinION reads based on de novo assembly, revealing a single circular complete chromosome. With the length of 2,550,458 bp and G + C content of 60.04%, the genome contains 2,492 genes, including 2,433 CDSs, 9 rRNAs, 46 tRNAs, 4 ncRNAs, and 134 pseudo genes. Previously predicted virulence proteins of C. ances were detected in the genome. Genome comparation with 200 C. acnes strains isolated from healthy facial skin revealed SLST D1 strain-specific genes and a unique variant of the znuC gene in D1 strains.
Authors
- Jae‐Ho Shin (ORCID: https://orcid.org/0000-0001-6450-9787)
- Jin Mo Kim
- Ryeong-Hui Kim
- Da-Ryung Jung
- Ji Hoon Ha (ORCID: https://orcid.org/0000-0001-8250-0313)
- Jiwoo Jang (ORCID: https://orcid.org/0009-0004-8879-2985)
- YeonGyun Jung (ORCID: https://orcid.org/0000-0002-4117-7369)
- Yoon Soo Cho (ORCID: https://orcid.org/0000-0002-9959-3285)
- Ikwhan Kim
- Jin Young Kim (ORCID: https://orcid.org/0000-0002-0656-1269)
- Do-Kyung Lee (ORCID: https://orcid.org/0000-0003-3123-6086)
- Jun-Tae Bae
- Eun Kyung Lee (ORCID: https://orcid.org/0000-0003-3529-1912)
Institutions
- Hallym University (KR)
- Kyungpook National University (KR)
- Sacred Heart Hospital (US)
- Sacred Heart Hospital (US)
- Kolmar Korea (South Korea) (KR)
- Hallym University Hangang Sacred Heart Hospital (KR)
Publication Details
- Journal
- BMC Genomic Data
- Published
- 2024-11-05
- DOI
- https://doi.org/10.1186/s12863-024-01277-z
- Citations
- 2
- Primary Topic
- Acne and Rosacea Treatments and Effects
- Type
- article
- Field-Weighted Citation Impact
- 1.07
Funders
- Ministry of Environment
- Korea Health Industry Development Institute
- Ministry of Education, India
- Korea Environmental Industry and Technology Institute