Pan-genome analysis reveals genomic variations during enoki mushroom domestication, with emphasis on genetic signatures of cap color and stipe length
This study uncovered significant genomic variations between cultivated and wild F. filiformis populations, including the loss of pathogen resistance genes during domestication. We also identified key genes linked to cap color and stipe length, demonstrating for the first time the important role of PAV variation in mushroom domestication. These insights provide a foundation for future mushroom breeding and evolutionary research.
Authors
- Bin Cao (ORCID: https://orcid.org/0000-0001-9445-1790)
- Jianping Xu (ORCID: https://orcid.org/0000-0003-2915-2780)
- Mao-Qiang He (ORCID: https://orcid.org/0000-0002-9300-7484)
- Bei Han
- Rui-Lin Zhao (ORCID: https://orcid.org/0000-0001-8129-9339)
- Zhi-Lin Ling
- Xiaomei Ma (ORCID: https://orcid.org/0000-0001-9472-8032)
- Bo Wang (ORCID: https://orcid.org/0000-0003-3713-0856)
- Xinyu Zhu (ORCID: https://orcid.org/0000-0002-1805-7203)
- Fei Liu (ORCID: https://orcid.org/0000-0003-1175-4070)
Institutions
- Chinese Academy of Sciences (CN)
- Institute of Microbiology (CN)
- Sichuan Academy of Agricultural Sciences (CN)
- University of Chinese Academy of Sciences (CN)
- McMaster University (CA)
Publication Details
- Journal
- Journal of Advanced Research
- Published
- 2024-11-05
- DOI
- https://doi.org/10.1016/j.jare.2024.11.005
- Citations
- 14
- Primary Topic
- Fungal Biology and Applications
- Type
- article
- Field-Weighted Citation Impact
- 6.27