Potential Cryptic Diversity in the Genus Scoliodon (Carcharhiniformes: Carcharhinidae): Insights from Mitochondrial Genome Sequencing
<i>Scoliodon</i> is a genus of small placental sharks living in offshore waters. For a long time, the genus was considered a monotypic genus until a valid species, <i>Scoliodon macrorhynchos</i>, was confirmed in 2010. However, <i>S. muelleri</i> in the same study was not widely recognized because of the lack of evidence. In this study, we obtained the complete mitochondrial genome of the genus <i>Scoliodon</i> from Ranong, Thailand, and tentatively named it <i>Scoliodon</i> sp. By comparing the complete mitochondrial genome with those of two other <i>Scoliodon</i> species and conducting phylogenetic and divergence time analyses, we determined that <i>Scoliodon</i> sp. diverged from the other species. These findings indicate the potential for a new cryptic species (<i>Scoliodon</i> sp.) in the <i>Scoliodon</i> genus. This conclusion was further supported by a subsequent analysis of the published <i>S. laticaudus</i> control region sequences from previous studies. Finally, based on these conclusions, we used machine learning to derive a new identification method for the cryptic species. This approach may be useful for the discovery of new species or cryptic species in other organisms.
Authors
- Pichai Sonchaeng
- Sarawut Siriwong
- Peiyuan Ye
- Yuanxiang Miao
- Chen Wang (ORCID: https://orcid.org/0000-0001-9780-9460)
- Xiao Chen (ORCID: https://orcid.org/0000-0001-6375-1635)
- Junjie Wang (ORCID: https://orcid.org/0000-0002-0765-0351)
- Shaobo Chen (ORCID: https://orcid.org/0000-0003-1211-602X)
Institutions
- South China Agricultural University (CN)
- Burapha University (TH)
- South China Normal University (CN)
- Xiamen University (CN)
- ShanghaiTech University (CN)
- Zhejiang Mariculture Research Institute (CN)
Publication Details
- Journal
- International Journal of Molecular Sciences
- Published
- 2024-11-04
- DOI
- https://doi.org/10.3390/ijms252111851
- Citations
- 2
- Primary Topic
- Ichthyology and Marine Biology
- Type
- article
- Field-Weighted Citation Impact
- 1.38
Funders
- National Key Research and Development Program of China