Automated-Screening Oriented Electric Sensing of Vitamin B1 Using a Machine Learning Aided Solid-State Nanopore

Micronutrient detection and identification at the single-molecule level are paramount for both clinical and home diagnostics. Analytical tools such as high-performance liquid chromatography and liquid chromatography-tandem mass spectrometry have been widely used but include a high instrument cost and prolonged analysis time. Here, as a model system, by merging nanopore signatures with machine learning algorithms, we propose an automated electric sensing strategy to identify vitamin B1 and its phosphorylated derivatives with good accuracy. Further, the relationship between vitamin B1 dynamics and nanopore signatures is examined. To understand the machine-decision-making process, Shapley additive explanations are made. Using a machine learning aided solid-state nanopore, we pave the way for next-generation micronutrient detection.

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Publication Details

Journal
The Journal of Physical Chemistry B
Published
2024-10-31
DOI
https://doi.org/10.1021/acs.jpcb.4c05619
Citations
1
Primary Topic
Nanopore and Nanochannel Transport Studies
Type
article
Field-Weighted Citation Impact
0.18

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article

Automated-Screening Oriented Electric Sensing of Vitamin B1 Using a Machine Learning Aided Solid-State Nanopore

Biswarup Pathak, Sneha Mittal, Milan Kumar Jena
1 citations
The Journal of Physical Chemistry B
Nanopore and Nanochannel Transport Studies
0.18
article

Automated-Screening Oriented Electric Sensing of Vitamin B1 Using a Machine Learning Aided Solid-State Nanopore

Biswarup Pathak, Sneha Mittal, Milan Kumar Jena
article en
1 citations

Abstract

Micronutrient detection and identification at the single-molecule level are paramount for both clinical and home diagnostics. Analytical tools such as high-performance liquid chromatography and liquid chromatography-tandem mass spectrometry have been widely used but include a high instrument cost and prolonged analysis time. Here, as a model system, by merging nanopore signatures with machine learning algorithms, we propose an automated electric sensing strategy to identify vitamin B1 and its phosphorylated derivatives with good accuracy. Further, the relationship between vitamin B1 dynamics and nanopore signatures is examined. To understand the machine-decision-making process, Shapley additive explanations are made. Using a machine learning aided solid-state nanopore, we pave the way for next-generation micronutrient detection.

The Journal of Physical Chemistry BVol. 129(4)
Indian Institute of Technology Indore (IN)
Council of Scientific and Industrial Research, India, University Grants Commission, Ministry of Education, India, Science and Engineering Research Board
Zero hunger
Openalex Percentile: Top 51%
Nanopore and Nanochannel Transport Studies
0.18
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